Job Description P03819 Confidence 96.53% Date Thu Jan 5 10:58:01 GMT 2012 Rank 171 Aligned Residues 136 % Identity 19% Template c1hyhA_ PDB info PDB header:oxidoreductase (choh(d)-nad+(a)) Chain: A: PDB Molecule:l-2-hydroxyisocaproate dehydrogenase; PDBTitle: crystal structure of l-2-hydroxyisocaproate dehydrogenase from2 lactobacillus confusus at 2.2 angstroms resolution-an example of3 strong asymmetry between subunits Resolution 2.20 Å

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		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440									.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.																		.	.	.	.	.	.	.	.
Query SS confidence																										.	.																		.	.	.	.	.	.	.	.
Query Sequence		P	R	V	I	I	A	G	F	G	R	F	G	Q	I	T	G	R	L	L	L	S	S	G	V	.	.	K	M	V	V	L	D	H	D	P	D	H	I	E	T	L	R	K	.	.	.	.	.	.	.	.	F	G	M	K	V	F	Y	G	D	A	T	R	M	D	L	L	E	S	A	G	A	A	K	A	E	V	L	I	N
Query Conservation																										.	.																		.	.	.	.	.	.	.	.
Alig confidence																										.	.																		.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.
Template Sequence		R	K	I	G	I	I	G	L	G	N	V	G	A	A	V	A	H	G	L	I	A	Q	G	V	A	D	D	Y	V	F	I	D	A	N	E	A	K	V	K	A	D	Q	I	D	F	Q	D	A	M	A	N	L	E	A	H	G	N	I	V	I	N	D	W	A	A	.	.	.	.	.	.	L	A	D	A	D	V	V	I	S
Template Known Secondary structure										S														T			S							S	S															G	G	G	S	S	S							S		G	G	G	.	.	.	.	.	.	G	T	T		S
Template Predicted Secondary structure																																																																			.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.							.	.	.	90	.	.	.	.	.
		470	.	.	.	.	.	.													.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500					.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.		.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.																		.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.																		.
Query Sequence		A	I	D	D	P	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	N	L	Q	L	T	E	M	V	K	E	H	F	P	H	L	Q	I	I	A	R	A	R	D	V	.	.	.	.	D	H	Y	I	R	L	R	Q	A	G	V	E	K	P	E	R	E	.	T	F	E	G	A	L	K	T	G	R	L	A	L	E	S
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.																		.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.																		.
Template Conservation
Template Sequence		T	L	G	N	I	K	L	Q	Q	F	A	E	L	K	F	T	S	S	M	V	Q	S	V	G	T	N	L	K	E	S	G	F	H	G	V	L	V	V	I	S	N	P	V	D	V	I	T	A	L	F	Q	H	V	T	G	F	P	A	H	K	V	I	G	T	G	T	L	L	D	T	A	R	M	Q	R	A	V	G	E	A
Template Known Secondary structure				S		G	G	G	T			T	T																		T	T			S						S	S	S																G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		533	.	.	.	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	L	G	P	Y	E	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	L	D	P	R	S	V	S
Template Known Secondary structure			T			G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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