Job Description P03819 Confidence 95.35% Date Thu Jan 5 10:58:01 GMT 2012 Rank 303 Aligned Residues 138 % Identity 15% Template c1ez4B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:lactate dehydrogenase; PDBTitle: crystal structure of non-allosteric l-lactate dehydrogenase2 from lactobacillus pentosus at 2.3 angstrom resolution Resolution 2.30 Å

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		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.								.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.													.	.	.	.	.	.	.
Query SS confidence																													.	.													.	.	.	.	.	.	.
Query Sequence		E	E	Q	P	R	V	I	I	A	G	F	G	R	F	G	Q	I	T	G	R	L	L	L	S	S	G	V	.	.	K	M	V	V	L	D	H	D	P	D	H	I	.	.	.	.	.	.	.	E	T	L	R	K	F	G	M	K	V	F	Y	G	D	A	T	R	M	D	L	L	E	S	A	G	A	A	K	A	E	V	L
Query Conservation																													.	.													.	.	.	.	.	.	.
Alig confidence																													.	.													.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.
Template Sequence		P	N	H	Q	K	V	V	L	V	G	D	G	A	V	G	S	S	Y	A	F	A	M	A	Q	Q	G	I	A	E	E	F	V	I	V	D	V	V	K	D	R	T	K	G	D	A	L	D	L	E	D	A	Q	A	F	T	A	P	K	K	I	Y	S	G	E	Y	S	D	.	.	.	.	.	.	C	K	D	A	D	L	V
Template Known Secondary structure		T	T	B									S														T			S							S	S													G	G	G	G	G	S										G	G	G	.	.	.	.	.	.	G	T	T		S
Template Predicted Secondary structure																																																																					.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.							.	.	.	.	.	90	.
		468	.	470	.	.	.	.																.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.			.	.	.	510	.				.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.						.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.						.	.	.
Query Sequence		I	N	A	I	D	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	N	L	Q	L	T	E	M	V	K	E	H	F	P	H	L	Q	I	I	A	R	A	R	D	V	D	H	Y	I	R	L	.	.	R	Q	A	G	V	.	.	.	E	K	P	E	R	E	T	F	E	G	A	L	K	T	G	R
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.						.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.						.	.	.
Template Conservation
Template Sequence		V	I	T	A	G	A	P	Q	K	P	G	E	S	R	L	D	L	V	N	K	N	L	N	I	L	S	S	I	V	K	P	V	V	D	S	G	F	D	G	I	F	L	V	A	A	N	P	V	D	I	L	T	Y	A	T	W	K	F	S	G	F	P	K	E	R	V	I	G	S	G	T	S	L	D	S	S	R	L	R	V
Template Known Secondary structure											T	T																								T	T			S						S	S	S																G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		528	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	L	E	S	L	G	L	G	P	Y	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	G	K	Q	F	N	V	D	P	R	S	V
Template Known Secondary structure								T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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