Return to main results Retrieve Phyre Job Id

Job DescriptionP03819
Confidence96.94%DateThu Jan 5 10:58:01 GMT 2012
Rank124Aligned Residues95
% Identity26%Templatec1dliA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:udp-glucose dehydrogenase; PDBTitle: the first structure of udp-glucose dehydrogenase (udpgdh) reveals the2 catalytic residues necessary for the two-fold oxidation
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   401........410.........420.........430.........440.........450.........460. .......
Predicted Secondary structure 



















............



Query SS confidence 




























































. . . . . . . . . . . .






Query Sequence  RVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGA. . . . . . . . . . . . AKAEVLI
Query Conservation   


 
 
  
  

  
   
    


 
   
      
     


     
  


............  
  

Alig confidence 


















.

























..












............






Template Conservation 

 









 
  

. 
  
 
 
     

 
  
  
  ..
  
             
         




Template Sequence  KIAVAGSGYVGLSLGVLLS. LQNEVTIVDILPSKVDKINNGLSPIQ. . DEYIEYYLKSKQLSIKATLDSKAAYKEAELVI
Template Known Secondary structure 

ST.TTS
S
TT

SS
..
S


S

S
Template Predicted Secondary structure 

.











..












Template SS confidence 















































































   2.......10.........20 .........30.........40...... ...50.........60.........70........
 
   469470.. .......480.........490........
Predicted Secondary structure 

..........





Query SS confidence 



. . . . . . . . . .

























Query Sequence  NAID. . . . . . . . . . DPQTNLQLTEMVKEHFPHLQIIARAR
Query Conservation   
  ..........
           
   
   




 
Alig confidence 



..........

























Template Conservation 
 



        
   
      
     
  

  

Template Sequence  IATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKST
Template Known Secondary structure 




TTTT


SS

S
Template Predicted Secondary structure 
















Template SS confidence 







































   7980.........90.........100.........110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions