 |
Job Description | P0ADZ4 | Confidence | 2.71% | Date | Thu Jan 5 11:22:08 GMT 2012 |
Rank | 66 | Aligned Residues | 71 |
% Identity | 11% | Template | d1fx0a1 |
SCOP info | Left-handed superhelix
| C-terminal domain of alpha and beta subunits of F1 ATP synthase
| C-terminal domain of alpha and beta subunits of F1 ATP synthase
|
Resolution | 3.20 |
|
 |
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | T | A | K | I | V | S | E | F | G | R | D | A | N | D | T | G | S | T | E | V | Q | V | A | L | L | T | A | Q | I | N | H | L | Q | G | H | F | A | E | H | K | K | D | H | H | S | R | R | G | L | L | R | M | V | S | Q | R | R | K | L | L | D | Y | L | K | R | K | D | V | A | R | Y | T | Q | L | I | E | R | L |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|
|
|   |
|
|   |
|
|   |   |
|   |   |
|
|   |   |   |   |
|
|   |   |   |   |
|   |
|   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|   |
|
|
|
|
|   |   |   |   |
|   |   |
|   |
|
|
|   |   |
|   |
|   |   |   |
|   |
|
|   |
| . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
Template Sequence |   |
A | R | G | Q | R | L | R | E | L | L | K | Q | P | Q | S | A | P | L | T | V | E | E | Q | V | M | T | I | Y | T | G | T | N | G | Y | L | D | S | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | L | D | Q | V | R | K | Y | L | V | E | L | R | T | Y | V | K | T | N | K | P | E | F | Q | E | I | I | S | S | T | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
| T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S | S | S | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
412 | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 |
  |
  |   |
86 | . |
Predicted Secondary structure |   |
|
|
Query SS confidence |   |
|
|
Query Sequence |   |
G | L |
Query Conservation |   |
|
|
Alig confidence |   |
|
|
Template Conservation |   |
  |
|
Template Sequence |   |
T | F |
Template Known Secondary structure |   |
S |
|
Template Predicted Secondary structure |   |
|
|
Template SS confidence |   |
|
|
  |   |
481 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|