Job Description P0ADZ4 Confidence 8.14% Date Thu Jan 5 11:22:08 GMT 2012 Rank 17 Aligned Residues 44 % Identity 16% Template c2v4hA_ PDB info PDB header:transcription Chain: A: PDB Molecule:nf-kappa-b essential modulator; PDBTitle: nemo cc2-lz domain - 1d5 darpin complex Resolution 2.9 Å

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		28	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure								.	.	.																							.
Query SS confidence								.	.	.																							.
Query Sequence		Q	V	A	L	L	T	.	.	.	A	Q	I	N	H	L	Q	G	H	F	A	E	H	K	K	D	H	H	S	R	R	G	.	L	L	R	M	V	S	Q	R	R	K	L	L	D	Y	L	K
Query Conservation								.	.	.																							.
Alig confidence								.	.	.																							.
Template Conservation
Template Sequence		E	A	E	Q	H	K	I	V	M	E	T	V	P	V	L	K	A	Q	A	D	I	Y	K	A	D	F	Q	A	E	R	H	A	R	E	K	L	V	E	K	K	E	Y	L	Q	E	Q	L	E
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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