Job Description P0AFD4 Confidence 90.13% Date Thu Jan 5 11:25:58 GMT 2012 Rank 1 Aligned Residues 126 % Identity 17% Template c3rkoL_ PDB info PDB header:oxidoreductase Chain: L: PDB Molecule:nadh-quinone oxidoreductase subunit l; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	F	A	I	V	P	V	S	P	G	W	V	V	A	D	L	N	I	G	I	L	F	F	L	M	M	A	G	L	A	V	Y	A	V	L	F	A	G	W	S	S	N	N	K	Y	S	L	L	G	A	M	R	A	S	A	Q	T	L	S	Y	E	V	F	L	G	L	S	L	M	G	V	V	A	Q	A	G	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	F	A	Y	T	N	L	F	I	A	S	M	V	V	L	V	L	A	D	N	L	L	L	M	Y	L	G	W	E	G	V	G	L	C	S	Y	L	L	I	G	F	Y	Y	T	D	P	K	N	G	A	A	A	M	K	A	F	V	V	T	R	V	G	D	V	F	L	A	F	A	L	F	I	L	Y	N	E	L	G	T	L
Template Known Secondary structure																		T	B	S	B	S																			T	T	S	T	T	S																																T	S
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220
Predicted Secondary structure													.	.																													.	.
Query SS confidence													.	.																													.	.
Query Sequence		N	M	T	D	I	V	N	S	Q	A	H	.	.	V	W	N	V	I	P	Q	F	F	G	F	I	T	F	A	I	A	G	V	A	V	C	H	R	H	P	F	D	.	.	Q	P	E	A	E	Q	E
Query Conservation													.	.																													.	.
Alig confidence													.	.																													.	.
Template Conservation
Template Sequence		N	F	R	E	M	V	E	L	A	P	A	H	F	A	D	G	N	N	M	L	M	W	A	T	L	M	L	L	G	G	A	V	G	K	S	A	Q	L	P	L	Q	T	W	L	A	D	A	M	A	G
Template Known Secondary structure		B													T	T		S	S	S																	T		T	T	S	T	T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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