 |
| Job Description | P0AFD4 | | Confidence | 2.53% | Date | Thu Jan 5 11:25:58 GMT 2012 |
| Rank | 27 | Aligned Residues | 26 |
| % Identity | 12% | Template | c3etoB_ |
| PDB info |
PDB header:signaling protein | Chain: B: PDB Molecule:neurogenic locus notch homolog protein 1; |
PDBTitle: 2 angstrom xray structure of the notch1 negative regulatory region2 (nrr)
|
| Resolution | 2.00 Å |
|
| | |
197 | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | |
|
. | . | . | . | . | . | . | . | . | 220 | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | |
|
|
|
| . | . |
|
|
|
|
|
|
|
| | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
I | T | F | A | I | A | G | V | A | V | C | H | R | H | . |
. |
P | F | D | Q | P | E | A | E | Q | E | L | A |
| Query Conservation | |
| | | |
| | |
|
|
| | |
| | . | . |
|
|
| | |
|
|
|
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| | |
| |
| | | | | | |
| | | | | |
| | | | | | | | |
| Template Sequence | |
V | A | A | F | L | G | A | L | A | S | L | G | S | L | N | I | P | Y | K | I | E | A | V | Q | S | E | T | V |
| Template Known Secondary structure | |
| | | | | | | | | | | T |
|
|
|
| S | S |
|  | | | | | |  |
|
|
| Template Predicted Secondary structure | |
| | | | | | | | | |
|
|
|
|
|
|
| | | | | | | | | | |
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
1700 | . | . | . | . | . | . | . | . | . | 1710 | . | . | . | . | . | . | . | . | . | 1720 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
