Job Description P0AFD4 Confidence 1.88% Date Thu Jan 5 11:25:58 GMT 2012 Rank 46 Aligned Residues 19 % Identity 32% Template c1qloA_ PDB info PDB header:membrane proteins Chain: A: PDB Molecule:herpes simplex virus protein icp47; PDBTitle: structure of the active domain of the herpes simplex virus2 protein icp47 in water/sodium dodecyl sulfate solution3 determined by nuclear magnetic resonance spectroscopy Resolution UNK

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	R	Y	G	P	N	R	V	G	W	G	G	S	L	Q	L	V	A	D	M	I	K	M	F	F	K	E
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.
Template Sequence		N	M	R	V	G	P	.	.	.	.	.	.	.	.	.	R	T	Y	A	D	V	R	D	E	I	N	K	R
Template Known Secondary structure		T		S	S	S		.	.	.	.	.	.	.	.	.													T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.										20	.	.	.	.	.	.	.	.	.	30	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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