 |
Job Description | P0AB91 | Confidence | 22.10% | Date | Thu Jan 5 11:14:55 GMT 2012 |
Rank | 90 | Aligned Residues | 84 |
% Identity | 24% | Template | d1igwa_ |
SCOP info | TIM beta/alpha-barrel
| Phosphoenolpyruvate/pyruvate domain
| Phosphoenolpyruvate mutase/Isocitrate lyase-like
|
Resolution | 2.10 |
|
 |
  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | S | A | K | H | V | A | E | V | K | E | G | L | N | K | A | G | L | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | Q | V | M | I | D | F | S | H | A | N | S | S | K | Q | F | K | K | Q | M | D | V | C | A | D | V | C | Q | Q | I | A | G | G | E | K | A | I | I | G | V |
Query Conservation |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
Template Conservation |   |
  |   |   |   |
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|   |
|
|
|
|
| . | . | . | . | . |   |   |   |
|
|   |
|
|
|   |   |   |   |   |
|
|
|
| . | . | . |   |
|
Template Sequence |   |
Y | P | A | N | S | V | P | A | V | V | E | R | I | N | N | T | F | R | R | A | D | Q | I | Q | W | S | A | G | I | E | P | G | D | P | R | Y | V | D | Y | F | L | P | I | V | A | D | A | E | A | G | F | G | . |
. |
. |
. |
. |
G | V | L | N | A | F | E | L | M | K | A | M | I | E | A | G | A | A | . |
. |
. |
A | V |
Template Known Secondary structure |   |
S |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T |
| T | T |
|
|
|
|
|
|
|  |  |  |  |
| T | T |
| S | S | . | . | . | . | . | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | . | . | . |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
112 | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | |
|
|
. | . |
  |
  |   |
300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | V | E | S | H | L | V | E | G | N | Q | S | L | E | S | G | E | P | L | A | Y | G | K | S | I | T | D | A | C | I | G | W | E | D | T | D | A | L | L | R | Q | L | A | N | A | V | K | A | R |
Query Conservation |   |
|
|
|
|   |
|   |   |
|   |
|   |
|   |
|   |   |   |
|   |
|
|   |
|
|
|
|   |
|
|   |
|   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |   |
|
Alig confidence |   |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
| . | . | . | . | . | . |
|
|   |   |
|
|
|
| . | . | . |
|
|   |
|
|   | . | . | . | . | . | . | . |   |   |
|   |   |   |
|
|   |
|
|   |   |
|
|
Template Sequence |   |
H | F | E | D | . |
. |
. |
. |
. |
. |
Q | L | A | S | V | K | K | C | . |
. |
. |
G | K | V | L | V | P | . |
. |
. |
. |
. |
. |
. |
T | Q | E | A | I | Q | K | L | V | A | A | R | L | C | A |
Template Known Secondary structure |   |
 |  |  | S | . | . | . | . | . | . | B |
| G | G | G |
|
|
| . | . | . |
|
|  |  |
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
| . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
184 | . | . | . | |
|
|
|
|
|
. | . | 190 | . | . | . | . | . | |
|
|
. | . | . | . | 200 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|