Job Description P0AB91 Confidence 100.00% Date Thu Jan 5 11:14:55 GMT 2012 Rank 14 Aligned Residues 244 % Identity 20% Template c3t4cD_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	H	K	I	L	K	G	N	D	D	R	L	L	V	V	I	G	P	C	S	I	H	D	P	V	A	A	K	E	Y	A	T	R	L	L	A	L	R	E	E	L	K	D	E	L	E	I	V	M	R	V	Y	F	E	K	P	R	T	T	V	G	W	K	G	L	I	N	D	P	H	M	D	N	S	F	Q	I	N	D
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.						.	.	.						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.						.	.	.						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	Y	D	F	E	V	G	L	D	Q	P	F	F	L	I	A	G	T	C	V	V	E	S	E	Q	M	T	I	D	T	A	G	R	L	K	E	I	C	A	K	L	.	.	.	.	.	.	.	.	.	.	.	.	N	V	P	F	I	.	.	.	Y	K	S	S	M	.	.	.	.	.	.	.	.	.	.	.	D	E
Template Known Secondary structure				T	T				S	T	T	S									S	S																					T	.	.	.	.	.	.	.	.	.	.	.	.	T					.	.	.						.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.						.	.	.						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.													.	.	.	.	.				.	50	.	.	.												.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	R	I	A	R	K	L	L	L	D	I	N	D	S	G	L	P	A	A	G	E	F	L	D	M	I	T	P	Q	Y	L	A	D	L	M	S	W	G	A	I	G	A	R	T	T	E	S	Q	V	H	R	E	L	A	S	G	L	S	C	P	V	G	F	K	N	G	T	D	G	T	I	K	V	A	I	D	A	I	N
Query Conservation
Alig confidence												.	.	.
Template Conservation												.	.	.
Template Sequence		G	L	R	I	L	G	E	V	K	R	.	.	.	Q	L	G	L	P	V	L	T	D	V	H	S	I	D	E	I	E	Q	V	A	S	V	V	D	V	L	Q	T	P	A	F	L	C	R	Q	T	D	F	I	H	A	C	A	R	S	G	K	P	V	N	I	K	K	G	Q	F	L	A	P	H	D	M	K	N	V	I	D
Template Known Secondary structure												.	.	.			T									S									T	T		S						G	G	G	T	T										T	T	S	S								T	T	S		G	G	G
Template Predicted Secondary structure												.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	A	P	H	C	F	L	S	V	T	K	W	G	H	S	A	I	V	N	T	S	G	N	G	D	C	H	I	I	L	R	G	G	K	E	P	N	Y	S	A	K	H	V	A	E	V	K	E	G	L	N	K	A	G	L	P	A	Q	V	M	I	D	F	S	H	A	N	S	S	K	Q	F	K	K	Q	M	D	V
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.																		.																	.																						.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.																		.																	.																						.	.
Template Sequence		K	A	R	E	A	A	R	E	A	.	.	.	.	.	.	.	.	.	.	.	.	G	L	S	E	D	R	F	M	A	C	E	R	G	V	S	F	G	.	Y	N	N	L	V	S	D	M	R	S	L	A	I	M	R	E	.	T	S	A	P	V	V	F	D	A	T	H	S	V	Q	L	P	G	Q	R	E	F	.	.	V
Template Known Secondary structure										T	.	.	.	.	.	.	.	.	.	.	.	.	T			S													S	.	S	S												G	G	G	.	G	S	S										T						T	T		.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.																		.																	.																						.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.													.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.							.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		C	A	D	V	C	Q	Q	I	A	G	G	E	K	A	I	I	G	V	M	V	E	S	H	.	.	.	.	.	.	L	V	E	G	N	Q	S	L	E	S	G	E	P	L	A	Y	G	K	S	I	T	D	A	C	I	G	W	E	D	T	D	A	L	L	R	Q	L	A	N	A	V	K	A
Query Conservation																									.	.	.	.	.	.
Alig confidence															.	.	.								.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	L	A	R	A	A	V	A	T	G	V	A	.	.	.	G	L	F	M	E	T	H	P	N	P	A	E	A	K	S	D	G	P	N	A	V	P	L	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	G	A	L	L	E	T	L	V	T	L	D	Q	A	V	K	R
Template Known Secondary structure														S	.	.	.								S		T	T	T			T	T	S		S				G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	S
Template Predicted Secondary structure															.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.															.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions