Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB91
Confidence28.33%DateThu Jan 5 11:14:55 GMT 2012
Rank68Aligned Residues136
% Identity13%Templatec3na8A_
PDB info PDB header:lyaseChain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of a putative dihydrodipicolinate synthetase from2 pseudomonas aeruginosa
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70.........80.........90.........100.........110.....
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  VAHARKAIHKILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDN
Query Conservation 
   
  
  

 
 
 










 
   
 


  
  
       
 



 
 












 

    
Alig confidence 























.




















....












..
..............
Template Conservation   


  
             

 
.
   
    
  
  
   

....
 
 
 

     ..
..............
Template Sequence  DPEWDEVVDFTLKTVAHRVPTIVS. VSDLTTAKTVRRAQFAESLGA. . . . EAVXVLPISYWKL. . N. . . . . . . . . . . . . .
Template Known Secondary structure  TTSS
B.


SSTT
....S



SS

..
..............
Template Predicted Secondary structure 



.







....








..
..............
Template SS confidence 















































































   76...80.........90......... 100.........110.........120 .........130... .
 
   116...120.........130..... ....140.........150.........160.........170.........180.........190....
Predicted Secondary structure 


.



























Query SS confidence 



















.


























































Query Sequence  SFQINDGLRIARKLLLDIND. SGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIK
Query Conservation     
  

   
 

  
  . 






 

     
  



   




 


 


 




 





 
 
 
 
Alig confidence  ....





...






.





..............






























.






Template Conservation  ....   
  ...    

 
   

 ..............


 
  

       
  
    
 
 
 
. 
     
Template Sequence  . . . . EAEVFQ. . . HYRAVGEAIGVPVX. . . . . . . . . . . . . . LYNNPGTSGIDXSVELILRIVREVDNVTXVK. ESTGDIQ
Template Known Secondary structure  .......
SS
..............
S



STT.
SS
Template Predicted Secondary structure  .......



..............














.




Template SS confidence 















































































   135....140 .........150.... .....160.........170.........180..... ....190..
 
   195....200.........210....
Predicted Secondary structure 





Query SS confidence 



















Query Sequence  VAIDAINAAGAPHCFLSVTK
Query Conservation   

 

 

   
 

 
  
Alig confidence 



















Template Conservation                  
 
 
Template Sequence  RXHKLRLLGEGRVPFYNGNP
Template Known Secondary structure  TTT
S


T
Template Predicted Secondary structure 





Template SS confidence 



















   193......200.........210..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions