Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB91
Confidence20.52%DateThu Jan 5 11:14:55 GMT 2012
Rank101Aligned Residues82
% Identity26%Templatec3fozB_
PDB info PDB header:transferase/rnaChain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate transferase; PDBTitle: structure of e. coli isopentenyl-trna transferase in complex with e.2 coli trna(phe)
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70.........80.........90 .........100. ........110. .......
Predicted Secondary structure 









..........






..









.






Query SS confidence 






































. . . . . . . . . .










. .









.






Query Sequence  DRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIV. . . . . . . . . . MRVYFEKPRTT. . VGWKGLINDP. HMDNSFQ
Query Conservation   










 
   
 


  
  
       
 

..........

 
 





..






 

.       
Alig confidence 
























.........




..........










..









.






Template Conservation    

 
 







 


 

   ......... 







 



 







   
   






     
 

Template Sequence  PKAIFLMGPTASGKTALAIELRKIL. . . . . . . . . PVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYS
Template Known Secondary structure 


SSS
TTTS.........


SSTTBTT

TTTT


TTS
SSS
B
TTS


Template Predicted Secondary structure 








.........

























Template SS confidence 















































































   10.........20.........30.... .....40.........50.........60.........70.........80
 
   119120.........130....... ..140..
Predicted Secondary structure 

.

Query SS confidence 


















.




Query Sequence  INDGLRIARKLLLDINDSG. LPAAG
Query Conservation 
  

   
 

  
   
.




Alig confidence 


















.




Template Conservation 
  
   
   
  
  

  



Template Sequence  AADFRRDALAEMADITAAGRIPLLV
Template Known Secondary structure  TT
Template Predicted Secondary structure 


Template SS confidence 
























   81........90.........100.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions