Job Description P0AB91 Confidence 84.77% Date Thu Jan 5 11:14:55 GMT 2012 Rank 26 Aligned Residues 148 % Identity 14% Template c3eb2A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution Resolution 2.04 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	A	H	A	R	K	A	I	H	K	I	L	K	G	N	D	D	R	L	L	V	V	I	G	P	C	S	I	H	D	P	V	A	A	K	E	Y	A	T	R	L	L	A	L	R	E	E	L	K	D	E	L	E	I	V	M	R	V	Y	F	E	K	P	R	T	T	V	G	W	K	G	L	I	N	D	P	H	M	D
Query Conservation
Alig confidence																											.																						.	.	.	.														.	.		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.																						.	.	.	.														.	.		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	T	A	Q	R	E	A	V	V	R	A	T	I	E	A	A	Q	R	R	V	P	V	V	A	G	.	V	A	S	T	S	V	A	D	A	V	A	Q	A	K	L	Y	E	K	L	G	A	.	.	.	.	D	G	I	L	A	I	L	E	A	Y	F	P	L	.	.	K	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																		T	T	S	S		B				.				S	S															T		.	.	.	.	S									S	S			.	.		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.																						.	.	.	.														.	.		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.			.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		N	S	F	Q	I	N	D	G	L	R	I	A	R	K	L	L	L	D	I	N	D	.	S	G	L	P	A	A	G	E	F	L	D	M	I	T	P	Q	Y	L	A	D	L	M	S	W	G	A	I	G	A	R	T	T	E	S	Q	V	H	R	E	L	A	S	G	L	S	C	P	V	G	F	K	N	G	T	D	G	T	I
Query Conservation																							.
Alig confidence		.	.	.	.	.							.	.	.								.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.												.
Template Conservation		.	.	.	.	.							.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.												.
Template Sequence		.	.	.	.	.	D	A	Q	I	E	S	.	.	.	Y	F	R	A	I	A	D	A	V	E	I	P	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	T	N	P	Q	F	Q	R	S	D	L	T	L	D	V	I	A	R	L	A	.	E	H	P	R	I	R	Y	I	K	D	A	.	S	T	N	T
Template Known Secondary structure		.	.	.	.	.							.	.	.										S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T		S	S												.	T	S	T	T								.	S	S
Template Predicted Secondary structure		.	.	.	.	.							.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.												.
Template SS confidence
							115	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.															.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.		.	.	.	170
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.									.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.
Query Sequence		K	V	A	I	D	A	I	N	A	A	G	A	P	H	C	F	L	S	V	T	K	W	.	.	.	.	.	.	.	.	G	H	S	A	I	V	N	T	S	G	N
Query Conservation																								.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	L	L	S	I	I	N	R	C	G	D	A	L	Q	V	F	S	A	S	A	H	I	P	A	A	V	M	L	I	G	G	V	G	W	M	A	G	P	A	C
Template Known Secondary structure												G	G	G	S						T	T	S								T	T							G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions