Job Description P0AFY6 Confidence 99.95% Date Thu Jan 5 11:27:34 GMT 2012 Rank 1 Aligned Residues 311 % Identity 11% Template d3b60a2 SCOP info ABC transporter transmembrane region ABC transporter transmembrane region ABC transporter transmembrane region Resolution 3.70

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	F	A	L	F	W	F	I	Y	S	P	H	R	W	Q	Y	W	S	I	L	G	T	A	L	I	I	F	V	T	W	F	L	V	E	V	G	V	A	V	N	A	W	Y	A	P	F	Y	D	L	I	Q	T	A	L	S	S	P	H	K	V	T	I	E	Q	F	Y	R	E	V	G	V	F	L	G	I	A	L	I	A
Query Conservation
Alig confidence																			.	.	.	.	.	.																													.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.																													.	.	.	.	.	.
Template Sequence		Q	T	F	R	R	L	W	P	T	I	A	P	F	K	A	G	L	.	.	.	.	.	.	I	V	A	G	I	A	L	I	L	N	A	A	S	D	T	F	M	L	S	L	L	K	P	L	L	D	D	G	.	.	.	.	.	.	F	G	K	T	D	R	S	V	L	L	W	M	P	L	V	V	I	G	L	M	I	L	R
Template Known Secondary structure												G	G	G					.	.	.	.	.	.																						T					S	S	.	.	.	.	.	.	T	T	S	T	T							S
Template Predicted Secondary structure																			.	.	.	.	.	.																													.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.							.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.								.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																															.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.
Query Sequence		V	V	I	S	V	L	N	N	F	F	V	S	H	Y	V	F	R	W	R	T	A	M	N	E	Y	Y	M	A	N	.	.	.	.	.	.	.	W	Q	Q	L	R	H	I	E	G	A	A	Q	R	V	Q	E	D	T	M	R	F	A	S	T	L	E	N	M	G	V	S	F	I	N	A	I	M	T	L	I	A	F	L	P
Query Conservation																															.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	T	S	Y	I	S	S	Y	C	I	S	W	V	S	G	K	V	V	M	T	M	R	R	R	L	F	G	H	M	M	G	M	P	V	A	F	F	D	K	Q	S	T	G	T	L	L	S	R	I	T	Y	D	S	E	Q	V	A	S	S	S	S	G	A	L	I	T	V	V	R	E	G	A	S	I	I	G	L	F	I
Template Known Secondary structure																																	T			S	T					S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	V	T	L	S	A	H	V	P	E	L	P	I	I	G	H	I	P	Y	G	L	V	I	A	A	I	V	W	S	L	M	G	T	G	L	L	A	V	V	G	I	K	L	P	G	L	E	F	K	N	Q	R	V	E	A	A	Y	R	K	E	L	V	Y	G	E	D	D	A	T	R	A	T	P	P	T	V	R	E	L
Query Conservation
Alig confidence														.	.	.	.	.
Template Conservation														.	.	.	.	.
Template Sequence		M	M	F	Y	Y	S	W	Q	L	S	I	I	.	.	.	.	.	L	V	V	L	A	P	I	V	S	I	A	I	R	V	V	S	K	R	F	R	S	I	S	K	N	M	Q	N	T	M	G	Q	V	T	T	S	A	E	Q	M	L	K	G	H	K	E	V	L	I	F	G	G	Q	E	V	E	T	K	R	F	D	K	V
Template Known Secondary structure							T	T	T	T				.	.	.	.	.																																											T								T
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	A	V	R	K	N	Y	F	R	L	Y	F	H	Y	M	Y	F	N	I	A	R	I	L	Y	L	Q	V	D	N	V	F	G	L	F	L	L	F	P	S	I	V	A	G	T	I	T	L	G	L	M	T	Q	I	T	N	V	F	G	Q	V	R	G	A	F	Q	Y	L	I	N	S	W	T	T	L	V	E	L	M	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	N	K	M	R	L	Q	G	M	K	M	V	S	A	S	S	I	S	D	P	I	I	Q	L	I	A	S	L	A	L	A	F	V	L	Y	A	A	S	F	P	S	V	M	D	S	L	T	A	G	T	I	T	V	V	F	S	S	M	I	A	L	M	R	P	L	K	S	L	T	N	V	N	A	Q	F	Q	R	G	M	A
Template Known Secondary structure																																								S	S	S	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	K	R	L	R	S	F	E	H	E	L	D	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	C	Q	T	L	F	A	I	L	D	S	E	Q	E	K
Template Known Secondary structure												S
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions