Job Description P0AFY6 Confidence 99.93% Date Thu Jan 5 11:27:34 GMT 2012 Rank 2 Aligned Residues 322 % Identity 11% Template c2yl4A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:atp-binding cassette sub-family b member 10, PDBTitle: structure of the human mitochondrial abc transporter, abcb10 Resolution 2.85 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	G	L	F	A	L	F	W	F	I	Y	S	P	H	R	W	Q	Y	W	S	I	L	G	T	A	L	I	I	F	V	T	W	F	L	V	E	V	G	V	A	V	N	A	W	Y	A	P	F	Y	D	L	I	Q	T	A	L	S	S	P	H	K	V	T	I	E	Q	F	Y	R	E	V	G	V	F	L	G	I	A	L
Query Conservation
Alig confidence																					.	.	.	.	.	.																																				.	.	.
Template Conservation																					.	.	.	.	.	.																																				.	.	.
Template Sequence		G	L	P	E	A	R	K	L	L	G	L	A	Y	P	E	R	R	R	L	.	.	.	.	.	.	A	A	A	V	G	F	L	T	M	S	S	V	I	S	M	S	A	P	F	F	L	G	K	I	I	D	V	I	Y	T	N	P	T	V	D	.	.	.	Y	S	D	N	L	T	R	L	C	L	G	L	S	A	V	F	L
Template Known Secondary structure														G	G	G					.	.	.	.	.	.															T	T																T	T	S		.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.																																				.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.							.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.								.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.
Query Sequence		I	A	V	V	I	S	V	L	N	N	F	F	V	S	H	Y	V	F	R	W	R	T	A	M	N	E	Y	Y	M	A	N	.	.	.	.	.	.	.	W	Q	Q	L	R	H	I	E	G	A	A	Q	R	V	Q	E	D	T	M	R	F	A	S	T	L	E	N	M	G	V	S	F	I	N	A	I	M	T	L	I	A	F
Query Conservation																																	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	G	A	A	A	N	A	I	R	V	Y	L	M	Q	T	S	G	Q	R	I	V	N	R	L	R	T	S	L	F	S	S	I	L	R	Q	E	V	A	F	F	D	K	T	R	T	G	E	L	I	N	R	L	S	S	D	T	A	L	L	G	R	S	V	T	E	N	L	S	D	G	L	R	A	G	A	Q	A	S	V	G
Template Known Secondary structure																																				S								S																				T	T
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	V	L	V	T	L	S	A	H	V	P	E	L	P	I	I	G	H	I	P	Y	G	L	V	I	A	A	I	V	W	S	L	M	G	T	G	L	L	A	V	V	G	I	K	L	P	G	L	E	F	K	N	Q	R	V	E	A	A	Y	R	K	E	L	V	Y	G	E	D	D	A	T	R	A	T	P	P	T	V	R
Query Conservation
Alig confidence																.	.	.	.	.
Template Conservation																.	.	.	.	.
Template Sequence		I	S	M	M	F	F	V	S	P	N	L	A	T	F	.	.	.	.	.	V	L	S	V	V	P	P	V	S	I	I	A	V	I	Y	G	R	Y	L	R	K	L	T	K	V	T	Q	D	S	L	A	Q	A	T	Q	L	A	E	E	R	I	G	N	V	R	T	V	R	A	F	G	K	E	M	T	E	I	E	K	Y	A
Template Known Secondary structure																.	.	.	.	.																																											T							T	T
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.						.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	F	S	A	V	R	K	N	Y	F	R	L	Y	F	H	Y	M	Y	F	N	I	A	R	I	L	Y	L	Q	V	D	N	V	F	G	L	F	L	L	F	P	S	I	V	A	G	T	I	T	L	G	L	M	T	Q	I	T	N	V	F	G	Q	V	R	G	A	F	Q	Y	L	I	N	S	W	T	T	L	V	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	V	D	H	V	M	Q	L	A	R	K	E	A	F	A	R	A	G	F	F	G	A	T	G	L	S	G	N	L	I	V	L	S	V	L	Y	K	G	G	L	L	M	G	S	A	H	M	T	V	G	E	L	S	S	F	L	M	Y	A	F	W	V	G	I	S	I	G	G	L	S	S	F	Y	S	E	L	M	K	G
Template Known Secondary structure																																														T	T	S
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	I	Y	K	R	L	R	S	F	E	H	E	L	D	G	D	K	I	Q	E	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	A	G	G	R	L	W	E	L	L	E	R	E	P	K	L	P	F	N	E	G	V
Template Known Secondary structure													T				S	S		S	S		S	B
Template Predicted Secondary structure
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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