 |
| Job Description | P0AFS5 | | Confidence | 2.23% | Date | Thu Jan 5 11:27:09 GMT 2012 |
| Rank | 69 | Aligned Residues | 28 |
| % Identity | 4% | Template | d2od5a1 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Marine metagenome family WH1
|
| Resolution | 1.79 |
|
| | |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | |
. | . | . | . | . | . | . | . | 190 | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | |
|
|
| | | | . | | | | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
Q | L | P | G | K | F | Q | Q | M | M | A | R | P | V | E | . |
G | M | A | A | I | Q | R | A | I | D | S | V | S |
| Query Conservation | |
| | | | | | | | | |
| | | | | . | | | | | | | | | | | | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
| |
|
|
|
|
|
| |
|
|
|
|
|
| |
|
|
|
|
|
|
|
|
|
|
|
| Template Sequence | |
R | I | R | E | K | I | K | K | F | L | G | D | R | P | R | N | T | A | E | I | L | E | H | I | N | S | T | X | R |
| Template Known Secondary structure | |
| | | | | | | | | T | S | S | S |
|  |  | | | | | | | | | | T | S | S | S |
| Template Predicted Secondary structure | |
| | | | | | | | | | | |
|
|
|
| | | | | | | | | | |
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
