Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFS5
Confidence9.74%DateThu Jan 5 11:27:09 GMT 2012
Rank2Aligned Residues66
% Identity11%Templated1ppjc2
SCOP infoHeme-binding four-helical bundle Transmembrane di-heme cytochromes Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   182.......190.........200.........210.........220.........230.........240.......
Predicted Secondary structure 



Query SS confidence 

































































Query Sequence  GMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLAFALNYIPNIGSVLAAIP
Query Conservation                   
    
 
 

   
   
 


 
   
 
  
   

 

  
  
 
Alig confidence 

































































Template Conservation   
    
 

 



  

 
  
    

 

 


 
 
 

  
   
   

 

  
    
Template Sequence  GRGLYYGSYTFLETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWI
Template Known Secondary structure  TGGGSTT
BGGGGGSTTT
Template Predicted Secondary structure 



Template SS confidence 

































































   99100.........110.........120.........130.........140.........150.........160....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions