Job Description P0AFS5 Confidence 12.80% Date Thu Jan 5 11:27:09 GMT 2012 Rank 1 Aligned Residues 110 % Identity 25% Template c3rlbA_ PDB info PDB header:thiamine-binding protein Chain: A: PDB Molecule:thit; PDBTitle: crystal structure at 2.0 a of the s-component for thiamin from an ecf-2 type abc transporter Resolution 2.00 Å

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		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.						.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		V	W	G	L	L	A	F	A	L	N	Y	I	P	N	I	G	S	.	.	.	.	.	V	L	A	A	I	P	P	I	A	Q	V	L	V	F	N	G	F	Y	E	A	L	L	V	L	A	G	Y	L	L	I	N	L	V	F	G	N	I	L	E	P	R	I	M	G	R	G	L	G	L	S	T	L	V	V	F	L	S	L
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.															.																		.	.	.	.	.	.	.	.	.
Template Conservation																																						.																		.	.	.	.	.	.	.	.	.
Template Sequence		F	M	A	A	L	A	F	I	I	S	L	I	P	N	T	V	Y	G	W	I	I	V	E	I	A	C	I	P	I	L	L	L	S	L	R	R	.	G	L	T	A	G	L	V	G	G	L	I	W	G	I	L	S	M	.	.	.	.	.	.	.	.	.	I	T	G	H	A	Y	I	L	S	L	S	Q	A	F	L	E	Y
Template Known Secondary structure											T	T	S						T	T					G	G	G											.																		.	.	.	.	.	.	.	.	.		T	T		S			S	S
Template Predicted Secondary structure																																						.																		.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.										.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.										.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.
Query Sequence		I	F	W	G	W	L	L	G	P	V	G	M	L	.	.	.	.	.	.	.	.	.	L	S	V	P	L	T	I	I	V	K	I	A	L	E	Q	T	A	G	G	Q	S	I	A	V	L	L	S	D	L	N	K	E
Query Conservation															.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	A	P	V	S	L	G	I	A	G	L	F	R	Q	K	T	A	P	L	K	L	A	P	V	L	L	G	T	F	V	A	V	L	L	K	Y	F	F	H	F	I	A	G	I	I	F	W	S	Q	Y	A	W	K
Template Known Secondary structure		T						G	G	G	G	G	G	G				S	S	S																														G	G	G			T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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