|   |
59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | L | I | S | V | K | T | D | V | L | D | L | T | I | N | T | R | G | G | D | V | E | Q | A | L | L | P | A | Y | P | K | E | L | N | S | T | Q | P | F | Q | L | L | E | T | S | P | Q | F | I | Y | Q | A | Q | S | G | L | T | G | R | D | G | P | D | N | P | A | N | G | P | R | P | L | Y | N | V | E | K | D | A | Y |
Query Conservation |   |
  |   |
|   |
|   |
|   |   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|   |
|
|   |   |   |   | . | . |   |   |
|
|
|
|
|   |   |   |
|   |
|   |
Template Sequence |   |
P | V | L | H | L | K | H | A | V | G | T | A | K | I | S | L | Q | G | A | Q | L | I | S | W | K | P | Q | N | A | K | Q | D | V | L | W | L | S | E | V | E | P | F | K | N | G | N | A | I | R | G | G | V | P | I | C | Y | P | W | F | G | G | V | K | Q | . |
. |
P | A | H | G | T | A | R | I | R | L | W | Q | L | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |  |  |  |  |  |  | T | B | T | T |  |  |  |  |  |  |  | T | T |
| S | S |
| S | B |
| B |
| T | T |
|
|
|
| T | T | S |
|
| S | B | S |
|
|  |  | B | S | S |
| G | G | G | S | S | . | . | S | T | T | B | S | G | G | G | S | B |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | |
|
. | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
  |
  |   |
139 | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
. | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | A | E | G | Q | N | E | L | Q | V | P | M | T | Y | T | D | A | A | G | . |
N | T | F | T | K | T | F | V | L | K | R | G | D | Y | A | V | N | V | N | Y | N | V | Q | N | A | G | E | K | P | L | E | I | S | S | F | G | Q | L | K | Q | S | I | T | L | P | P | H | L | D | T | G | S | S | N | F | A | L | H | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
| . |   |   |
|   |
|   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
| . | . | . | . | . |
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|   |
|
|
|
|   |
|   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
H | Y | Y | I | S | V | H | K | V | R | L | E | F | E | L | F | S | D | L | N | I | I | E | A | K | V | S | M | V | F | T | . |
. |
. |
. |
. |
D | K | C | H | L | T | F | T | H | Y | G | E | E | S | A | Q | A | A | L | H | T | Y | F | N | I | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
D | I | N | Q | V | E | V | Q | G |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  | S | . | . | . | . | . | S | S |  |  |  |  |  |  |  |
|
| S | S |
|  |  |  |  |  |
|
|  |  |  |
| S | . | . | . | . | . | . | . | . | . |
| G | G | G |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | 160 | . | . | . | . | . |
  |
  |   |
218 | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
F | R | G | A | A | Y | S | T | P | D | E | K | Y | E | K | Y | K | F | D | T | I | A | D | N | E | N | L | N | I | S | S | K | G | G | W | V | A | M | L | Q | Q | Y | F | A | T | A | W | I | P | H | N | D | G | T | N | N | F | Y | T | A | N | L | G | N | G | I | A | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | P | E | T | C | F | N | S | L | N | Q | Q | Q | E | N | V | . |
. |
. |
. |
. |
. |
. |
P | S | P | R | H | I | S | E | N | V | D | C | I | Y | S | A | E | N | M | Q | N | Q | I | L | D | K | S | F | N | R | T | I | A | L | H | H | H | N | A | S | Q | F | V | L | W | N | P | W | H | K | K | T | S | G | M | S | E |
Template Known Secondary structure |   |
|
| S |  |  |  |  | T | T | T | T |  |  |  |  |
| . | . | . | . | . | . | . |
| S | S | B |
|
| S | S |
|  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  | S |
| S |  |  |  |  |  |  |
| T | T | S |
|
| T | T |
|
| T |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
286 | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
I | G | Y | K | S | Q | P | V | L | V | Q | P | G | Q | T | G | A | M | N | S | T | L |
Query Conservation |   |
. | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |
|
|
Template Sequence |   |
T | G | Y | Q | K | M | L | C | L | E | T | A | R | I | H | H | L | L | E | F | G | E | S | L | S | V | E | I | S | L |
Template Known Secondary structure |   |
T | G | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
239 | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . |
  |