Job Description P25714 Confidence 50.07% Date Thu Jan 5 11:42:16 GMT 2012 Rank 25 Aligned Residues 261 % Identity 10% Template c3ty1B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:hypothetical aldose 1-epimerase; PDBTitle: crystal structure of a hypothetical aldose 1-epimerase (kpn_04629)2 from klebsiella pneumoniae subsp. pneumoniae mgh 78578 at 1.90 a3 resolution Resolution 1.90 Å

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		59	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																.	.	.	.	120	.
Predicted Secondary structure											.									.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.									.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	I	S	V	K	T	D	V	.	L	D	L	T	I	N	T	R	.	G	G	D	V	E	Q	A	L	L	P	A	Y	P	K	E	L	N	S	T	Q	P	F	Q	L	L	E	T	S	P	Q	F	I	Y	Q	A	Q	S	G	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	D	G	P	D
Query Conservation											.									.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.									.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	L	T	I	H	S	K	D	G	L	T	I	T	L	S	P	T	R	G	X	N	L	L	R	I	E	G	F	G	S	R	X	G	W	D	S	P	V	K	E	V	V	N	P	A	F	I	N	L	E	S	R	N	G	L	G	W	L	E	G	F	N	E	X	X	V	R	C	G	Y	E	W	T	G	H	P	V	T	A
Template Known Secondary structure									T	T	S							G	G	G	T	T								T	T								S			S				G	G	G			T	T					T	G	G	G	G	T				S							S			S	S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		122			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.							.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure			.	.																					.																.	.	.	.	.	.
Query SS confidence			.	.																					.																.	.	.	.	.	.
Query Sequence		N	.	.	P	A	N	G	P	R	P	L	Y	N	V	E	K	D	A	Y	V	L	A	E	.	G	Q	N	E	L	Q	V	P	M	T	Y	T	D	A	A	.	.	.	.	.	.	G	N	T	F	T	K	T	F	V	L	K	R	G	D	Y	A	V	N	V	N	Y	N	V	Q	N	A	G	E	K	P	L	E	I	S	S
Query Conservation			.	.																					.																.	.	.	.	.	.
Alig confidence			.	.																					.																.	.	.	.	.	.
Template Conservation
Template Sequence		D	G	Q	I	Y	T	L	H	G	K	A	G	N	T	P	A	S	L	V	E	V	E	V	A	D	S	A	P	Y	E	I	R	I	R	G	L	V	K	E	S	T	F	K	K	A	D	L	Q	T	L	T	E	L	R	Y	V	P	G	S	N	S	F	S	L	H	D	V	L	T	N	H	A	D	Y	P	H	D	Y	Q	I
Template Known Secondary structure		T	T					T	T	B	S	G	G	G	S			S								S	S	T	T														T	T	T													T	T		S												S	S	S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.																.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	G	Q	L	K	Q	S	I	T	L	P	P	H	L	D	T	G	S	S	N	F	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	T	F	R	G	A	A	Y	S	T	P	D	E	K	Y	E	K	Y	K	F	D	T	I	A	D	N	E	N	L	N	I	S	S	K	G	G	W	V	A	M	L	Q
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Y	H	S	N	F	G	T	P	I	L	E	E	G	A	R	F	L	A	P	I	S	S	I	S	P	F	N	D	Y	A	K	S	G	L	K	T	W	Q	T	Y	Q	G	P	T	K	D	F	D	E	X	V	F	N	I	Q	P	L	A	D	E	N	H	Q	T	L	A	A	V	V	N	K	A	G	D	K	G	A	S	I
Template Known Secondary structure									T	T	T		S	T	T													S	S	G	G	G	G	G	G	S	T	T	T	T	B				S		T	T														T	T	S									S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		258	.							260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.						.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.																	.	.	.	.	.																														.	.
Query SS confidence				.	.	.	.	.	.																	.	.	.	.	.																														.	.
Query Sequence		Q	Y	.	.	.	.	.	.	F	A	T	A	W	I	P	H	N	D	G	T	N	N	F	Y	.	.	.	.	.	T	A	N	L	G	N	G	I	A	A	I	G	Y	K	S	Q	P	V	L	V	Q	P	G	Q	T	G	A	M	N	.	.	S	T	L	W	V	G	P	E	I	Q	D	K	M	A	A
Query Conservation				.	.	.	.	.	.																	.	.	.	.	.																														.	.
Alig confidence				.	.	.	.	.	.																	.	.	.	.	.																														.	.
Template Conservation
Template Sequence		Q	F	D	T	R	Q	L	P	V	L	T	L	W	K	N	T	D	T	V	K	Q	G	Y	V	T	G	I	E	P	G	T	S	Y	A	Y	P	V	T	I	E	R	K	Q	K	R	V	K	Q	L	Q	P	G	A	S	A	Q	F	D	L	T	Y	T	L	L	H	D	S	A	Q	V	A	A	V	E	Q
Template Known Secondary structure					T	T	T													T	T	T										S	S		S	S								T	T							T	T														S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions