 |
Job Description | P25714 | Confidence | 6.87% | Date | Thu Jan 5 11:42:16 GMT 2012 |
Rank | 64 | Aligned Residues | 22 |
% Identity | 23% | Template | c2rddB_ |
PDB info |
PDB header:membrane protein/transport protein | Chain: B: PDB Molecule:upf0092 membrane protein yajc; |
PDBTitle: x-ray crystal structure of acrb in complex with a novel2 transmembrane helix.
|
Resolution | 3.50 Å |
|
  |   |
418 | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | P | L | G | G | C | F | P | L | L | I | Q | M | P | I | F | L | A | L | Y | Y | M | L | M | G |
Query Conservation |   |
|
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |   |   |
|   | . | . | . |   |   |   |
|
|
|
|
|   |
|
|
Template Sequence |   |
S | P | M | S | L | I | L | M | L | V | V | . |
. |
. |
F | G | L | I | F | Y | F | M | I | L | R |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  | T |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | |
|
|
30 | . | . | . | . | . | . | . | . | . | 40 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|