Job Description P25714 Confidence 97.42% Date Thu Jan 5 11:42:16 GMT 2012 Rank 4 Aligned Residues 130 % Identity 12% Template c1ygaA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:hypothetical 37.9 kda protein in bio3-hxt17 PDBTitle: crystal structure of saccharomyces cerevisiae yn9a protein,2 new york structural genomics consortium Resolution 2.00 Å

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		59	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.									.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure											.																						.	.	.	.	.	.	.	.											.	.																										.	.	.	.
Query SS confidence											.																						.	.	.	.	.	.	.	.											.	.																										.	.	.	.
Query Sequence		K	L	I	S	V	K	T	D	V	.	L	D	L	T	I	N	T	R	G	G	D	V	E	Q	A	L	L	P	A	Y	P	.	.	.	.	.	.	.	.	K	E	L	N	S	T	Q	P	F	Q	.	.	L	L	E	T	S	P	Q	F	I	Y	Q	A	Q	S	G	L	T	G	R	D	G	P	D	N	P	.	.	.	.
Query Conservation											.																						.	.	.	.	.	.	.	.											.	.																										.	.	.	.
Alig confidence											.																						.	.	.	.	.	.	.	.											.	.																										.	.	.	.
Template Conservation
Template Sequence		G	V	I	T	I	G	D	E	K	K	F	Q	A	T	I	A	P	L	G	A	T	L	V	D	L	K	V	N	G	Q	S	V	V	Q	G	Y	S	N	V	Q	D	Y	L	T	D	G	N	M	M	G	A	T	V	G	R	Y	A	N	R	I	A	K	G	V	F	S	L	D	D	G	P	H	K	L	T	V	N	N	C	G
Template Known Secondary structure									T	T	T							T	B	T	T								T	T				B				S	S	G	G	G	G	T	T		S	S		T	T					S	B		S			G	G	G					T	T									B	T	T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
									124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.											.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	A	N	G	P	R	P	L	Y	N	V	E	K	D	A	Y	V	L	A	E	G	Q	N	E	L	Q	V	P	M	T	Y	T	D	A	A	G	.	.	.	.	.	.	.	.	.	.	N	T	F	T	K	T	F	V	L	K	R	G	D	Y	A	V	N	V	N	Y	N	V	Q	N	A	G	E	K
Query Conservation		.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.												.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.
Template Sequence		N	T	N	H	S	S	I	S	S	L	N	L	K	Q	Y	K	A	S	.	.	.	P	V	E	N	P	S	K	G	V	Y	V	V	E	F	K	L	L	D	D	H	T	Q	P	N	P	N	E	F	P	G	D	L	E	V	T	V	K	Y	T	L	N	V	A	E	M	T	L	D	M	E	Y	Q	A	Q	L	V	R	G	D
Template Known Secondary structure		B			T	T	G	G	G		G	G	G	S	B					.	.	.							T	T												S	S	S	S	S				S	S	S												T	T	T	T													S	S
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		187	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	E	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	P	I	N
Template Known Secondary structure						B
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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