Job Description P25714 Confidence 11.31% Date Thu Jan 5 11:42:16 GMT 2012 Rank 42 Aligned Residues 49 % Identity 22% Template c1w8xP_ PDB info PDB header:virus Chain: P: PDB Molecule:protein p16; PDBTitle: structural analysis of prd1 Resolution 4.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.														.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	D	S	Q	R	N	L	L	V	I	A	L	L	F	V	S	F	M	I	W	Q	A	W	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	D	K	N	P	Q	P	Q	A	Q	Q	T	T	Q	T	T	T	T	A	A	G	S	A	A	D
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	D	K	K	K	L	L	Y	W	V	G	G	G	L	V	L	I	L	I	W	L	W	F	R	N	R	P	A	A	Q	V	A	S	N	W	E	G	P	P	Y	M	T	Y	N	Q	P	Q	A	G	S	V	T	L	P	V	A	D	S	I	T	S	Q
Template Known Secondary structure						S	S																				T	T		S		S	S		T	T					T	T		S	S				S		S				S						T	T	T
Template Predicted Secondary structure
Template SS confidence
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No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions