Job Description P25714 Confidence 12.11% Date Thu Jan 5 11:42:16 GMT 2012 Rank 41 Aligned Residues 109 % Identity 16% Template c1v7wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:chitobiose phosphorylase; PDBTitle: crystal structure of vibrio proteolyticus chitobiose phosphorylase in2 complex with glcnac Resolution 1.60 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.							.	.	.	.	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																								.	.	.	.	.	.														.	.	.
Query SS confidence																								.	.	.	.	.	.														.	.	.
Query Sequence		S	V	K	T	D	V	L	D	L	T	I	N	T	R	G	G	D	V	E	Q	A	L	.	.	.	.	.	.	L	P	A	Y	P	K	E	L	N	S	T	Q	P	.	.	.	F	Q	L	L	E	T	S	P	Q	F	I	Y	Q	A	Q	S	G	L	T	G	R	D	G	P	D	N	P	A	N	G	P	R	P	L	Y	N
Query Conservation																								.	.	.	.	.	.														.	.	.
Alig confidence																								.	.	.	.	.	.														.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	G	T	E	K	F	C	T	V	I	S	H	N	A	G	G	Y	S	F	Y	N	S	P	E	Y	N	R	V	T	K	F	R	P	N	A	T	F	D	R	P	G	H	Y	V	Y	L	R	D	D	D	S	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	W	S
Template Known Secondary structure					S	S	S							T	T	S	B						S		T	T	T		B		B			B		S	S	S	S		B	S	B								T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80																								.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150								.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.
Query Sequence		V	E	K	D	A	Y	V	L	A	E	G	Q	N	E	L	Q	V	P	.	.	.	.	.	.	.	M	T	Y	T	D	A	A	G	N	T	F	T	K	T	F	V	L	K	R	G	D	Y	A	V	N	V	N	Y	N	V	Q	N	A	G	E	K	P	L	E	I	S	S	F	G
Query Conservation																				.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.								.
Template Conservation																																		.
Template Sequence		I	S	W	Q	P	V	A	K	S	L	D	E	A	Q	Y	Q	I	R	H	G	L	S	Y	S	K	F	Q	C	D	Y	N	G	.	I	H	A	R	K	T	L	F	V	P	K	G	E	D	A	E	I	W	D	V	V	I	K	N	T	S	D	Q	V	R	T	I	S	A	F	S
Template Known Secondary structure		S	S	S	T	T	T	T			T	T	T									T	T									T	T	.											T	T	S	S												S	S	S
Template Predicted Secondary structure																																		.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions