Job Description P25714 Confidence 53.79% Date Thu Jan 5 11:42:16 GMT 2012 Rank 22 Aligned Residues 101 % Identity 16% Template c1o7dD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:lysosomal alpha-mannosidase; PDBTitle: the structure of the bovine lysosomal a-mannosidase2 suggests a novel mechanism for low ph activation Resolution 2.70 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.											.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	I	S	V	K	T	D	V	L	D	L	T	I	N	T	R	G	G	D	V	E	Q	A	L	L	P	A	.	.	.	.	.	.	.	.	.	.	Y	P	K	E	L	N	S	T	Q	P	F	Q	L	L	E	T	S	P	Q	F	I	Y	Q	A	Q	S	G	L	T	G	R	D	G	P	D	N	P	A	N	G	P	R
Query Conservation																														.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.									.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	D	L	V	I	Q	N	E	Y	L	R	A	R	F	D	P	N	T	G	L	L	M	E	L	E	N	L	L	L	L	P	V	R	Q	A	F	Y	W	Y	N	A	S	T	G	N	N	.	.	.	.	.	L	S	S	Q	A	S	G	A	Y	I	F	R	P	N	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	K
Template Known Secondary structure									S	S							T	T	T		S																					B				B	T	.	.	.	.	.	T	B	S					S	S				B	S	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure																																																.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		603	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.						.	650	.	.	.	.	.	.	.	.	.	660	.	.													.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	Y	N	V	E	K	D	A	Y	V	L	A	E	G	Q	N	E	L	Q	V	P	M	T	Y	T	D	A	A	G	N	T	F	T	K	T	F	V	L	K	R	G	D	Y	A	V	N	V	N	Y	N	V
Query Conservation
Alig confidence																													.	.	.	.
Template Conservation																													.	.	.	.
Template Sequence		P	L	F	V	S	H	W	A	Q	T	H	L	V	K	A	S	L	V	Q	E	V	H	Q	N	F	S	A	.	.	.	.	W	C	S	Q	V	V	R	L	Y	P	R	Q	R	H	L	E	L	E	W	T	V
Template Known Secondary structure					S		S										S	S										T	.	.	.	.	T									T	T		S	S
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		669	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.					.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions