Job Description P25714 Confidence 9.13% Date Thu Jan 5 11:42:16 GMT 2012 Rank 49 Aligned Residues 119 % Identity 13% Template c1k1yA_ PDB info PDB header:transferase Chain: A: PDB Molecule:4-alpha-glucanotransferase; PDBTitle: crystal structure of thermococcus litoralis 4-alpha-glucanotransferase2 complexed with acarbose Resolution 2.40 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																											.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	L	I	S	V	K	T	D	V	L	D	L	T	I	N	.	T	R	G	G	D	V	E	Q	A	L	L	P	A	Y	P	K	E	L	N	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	F	Q	L	L	E	T	S	P	Q	F	I	Y	Q	A
Query Conservation																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	E	I	M	V	E	N	D	G	F	I	A	T	I	K	P	H	Y	G	G	S	I	F	E	L	S	S	K	R	K	A	V	N	Y	N	D	V	L	P	R	R	W	E	H	Y	H	E	Q	I	P	E	E	I	R	R	E	L	A	Y	D	W	Q	L	R	A	I	L	Q	D	H	F	I	K	P	E	E	T	L	D
Template Known Secondary structure		S								S	S							T	T	T	T	T								T	T	T	T			T	T									T	T										T	T					S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	G	L	T	G	R	D	G	P	D	N	P	A	N	G	P	R	P	L	Y	N	V	E	K	D	A	Y	V	L	A	E	G	Q	N	E	L	Q	V	P	M	T	Y	T	D	A	A	G	N	T	F	T	K	T	F	V	L	K	R	G	D	Y	A	V	N	V	N	Y	N	V	Q	N
Query Conservation
Alig confidence																																				.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.
Template Sequence		N	Y	R	L	V	K	Y	H	E	L	G	D	F	V	N	Q	P	Y	E	Y	E	M	I	E	N	G	V	K	L	W	R	E	G	G	.	.	.	.	.	.	V	Y	A	E	E	K	I	P	A	R	V	E	K	K	I	E	L	T	E	D	G	F	I	A	K	Y	R	V	L	L	E	K
Template Known Secondary structure					T	T	T	S				B	S		S	S	S								T	T										.	.	.	.	.	.			S	S	S														T	T											S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.
Template SS confidence
		501	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.							.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions