Job Description P0A9M0 Confidence 99.22% Date Thu Jan 5 11:10:41 GMT 2012 Rank 95 Aligned Residues 227 % Identity 17% Template c2qbyA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:cell division control protein 6 homolog 1; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

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		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.							.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																																																						.	.	.	.	.	.																			.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.																			.	.	.	.
Query Sequence		T	D	H	Y	G	L	E	R	V	K	D	R	I	L	E	Y	L	A	V	Q	S	R	V	N	K	I	K	G	P	I	L	C	L	V	G	P	P	G	V	G	K	T	S	L	G	Q	S	I	A	K	A	T	.	.	.	.	.	.	G	R	K	Y	V	R	M	A	L	G	G	V	R	D	E	A	E	I	.	.	.	.
Query Conservation																																																						.	.	.	.	.	.																			.	.	.	.
Alig confidence																	.	.																																				.	.	.	.	.	.																			.	.	.	.
Template Conservation																	.	.
Template Sequence		D	E	L	P	H	R	E	D	Q	I	R	K	I	A	S	.	.	I	L	A	P	L	Y	R	E	E	K	P	N	N	I	F	I	Y	G	L	T	G	T	G	K	T	A	V	V	K	F	V	L	S	K	L	H	K	K	F	L	G	K	F	K	H	V	Y	I	N	T	R	Q	I	D	T	P	Y	R	V	L	A	D	L
Template Known Secondary structure		S			T	T											.	.	S	S	G	G	G	G	G	T												T	T	S	S																T		S	S													S
Template Predicted Secondary structure																	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
					392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.				.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure		.	.	.																												.	.	.
Query SS confidence		.	.	.																												.	.	.
Query Sequence		.	.	.	R	G	H	R	R	T	Y	I	G	S	M	P	G	K	L	I	Q	K	M	A	K	V	G	V	K	N	P	.	.	.	L	F	L	L	D	E	I	D	K	M	S	S	D	M	R	G	D	P	A	S	A	L	L	E	V	L	D	P	E	Q	N	V	A	F	S	D	H	Y	L	E	V	D	Y	D	L	S	D
Query Conservation		.	.	.																												.	.	.
Alig confidence		.	.	.																												.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	S	L	D	V	K	V	P	F	T	G	L	S	I	A	E	L	Y	R	R	L	V	K	A	V	R	D	Y	G	S	Q	V	V	I	V	L	D	E	I	D	A	F	V	K	K	Y	N	D	D	I	L	Y	K	L	S	R	I	N	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	N	K
Template Known Secondary structure		T	T	T	T	S					S	S	S																T			S								T							S	S		S	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																	.	170	.	.
		466	.	.	.	470	.	.	.	.	.	.					.	.	.	480	.	.	.	.	.			.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.										.	.
Query SS confidence													.	.	.	.										.	.
Query Sequence		V	M	F	V	A	T	S	N	S	M	N	.	.	.	.	I	P	A	P	L	L	D	R	M	.	.	E	V	I	R	L	S	G	Y	T	E	D	E	K	L	N	I	A	K	R	H	L	L	P	K	Q	I	E	R	N	A	L	K	K	G	E	L	T	V	D	D	S	A	I	I	G	I	I	R	Y	Y	T	R	E	A
Query Conservation													.	.	.	.										.	.
Alig confidence													.	.	.	.										.	.																					.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.
Template Sequence		I	S	F	I	G	I	T	N	D	V	K	F	V	D	L	L	D	P	R	V	K	S	S	L	S	E	E	E	I	I	F	P	P	Y	N	A	E	E	L	E	D	I	L	T	K	R	.	.	.	.	.	.	.	.	A	Q	M	A	F	K	P	G	V	L	P	D	N	V	I	K	L	C	A	A	L	A	A	R	E	H
Template Known Secondary structure									S		G	G	G	G	G	G		T	T					T	T	T	T																					.	.	.	.	.	.	.	.					B		S	S		S															T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220									.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	R	G	L	E	R	E	I	S	K	L	C	R	K	A	V	K	Q	L	L	L	D	K	S	L	K	H	I	E	I	N	G	D	N	L	H	D	Y	L	G
Query Conservation
Alig confidence				.	.	.																						.	.	.
Template Conservation				.	.	.																						.	.	.
Template Sequence		G	D	.	.	.	A	R	R	A	L	D	L	L	R	V	S	G	E	I	A	E	R	M	K	D	T	.	.	.	K	V	K	E	E	Y	V	Y	M	A	K	E
Template Known Secondary structure				.	.	.																		T	T		S	.	.	.	S
Template Predicted Secondary structure				.	.	.																						.	.	.
Template SS confidence
		247	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions