95 c2qbyA_ Probab=99.22   E-value=8e-09  Score=79.51  Aligned_columns=227  Identities=17%

Q ss_pred             HHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHC------CCCEEEEECHHHCCHHHH----
Q ss_conf             5338969999999999998762688777448996287656446999999863------896599550120004440----
Q batch____       322 TDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKAT------GRKYVRMALGGVRDEAEI----  391 (784)
Q Consensus       322 ~~~~g~~~~k~~i~e~~~~~~~~~~~~~~~~ll~GpPGvGKT~la~~ia~~l------~~~~~~~~~~~~~~~~~l----  391 (784)
                      ++.+|.++-.+++.+  +........++..++++||||+|||++|+.+++.+      ...++.++.+.......+    
T Consensus        15 ~~~vGR~~e~~~l~~--~L~~~~~~~~~~~v~i~G~~G~GKT~La~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~i   92 (366)
T c2qbyA_          15 DELPHREDQIRKIAS--ILAPLYREEKPNNIFIYGLTGTGKTAVVKFVLSKLHKKFLGKFKHVYINTRQIDTPYRVLADL   92 (366)
T ss_dssp             SCCTTCHHHHHHHHH--SSGGGGGTCCCCCEEEEECTTSSHHHHHHHHHHHHHHHTCSSCEEEEEEHHHHCSHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHH--HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHH
T ss_conf             758483899999999--999886258986899988789998899999999985104778428995152223268899999


Q ss_pred             ---CCCCCCCCCCCHHHHHHHHHHCCCCCC---EEEEEEHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCC
Q ss_conf             ---367620045213689998863564588---38897125530224775778889884544466201243563001334
Q batch____       392 ---RGHRRTYIGSMPGKLIQKMAKVGVKNP---LFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSD  465 (784)
Q Consensus       392 ---~g~~~~yvg~~~g~i~~~l~~~~~~~p---VillDEidk~~~~~~~~~~~~lL~~lD~~q~~~~~d~~~~~~~d~s~  465 (784)
                         .+................+........   ++++||+|.+.................                +.++
T Consensus        93 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~l~~~~~~~~----------------~~~~  156 (366)
T c2qbyA_          93 LESLDVKVPFTGLSIAELYRRLVKAVRDYGSQVVIVLDEIDAFVKKYNDDILYKLSRINS----------------EVNK  156 (366)
T ss_dssp             TTTTSCCCCSSSCCHHHHHHHHHHHHHTCCSCEEEEEETHHHHHHSSCSTHHHHHHHHHH----------------SCCC
T ss_pred             HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC----------------CCCC
T ss_conf             997200012455667889999999973137877530245775002567999986320214----------------7898


Q ss_pred             EEEEEECCCCC----CCHHHHHCC--CEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC
Q ss_conf             79996158768----897686103--277648999899999987765799999818654433469899999984014021
Q batch____       466 VMFVATSNSMN----IPAPLLDRM--EVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREA  539 (784)
Q Consensus       466 v~~i~T~n~~~----i~~~ll~R~--~~i~~~~~~~~e~~~I~~~~~~~~~~~~~~~~~~~~~i~~~~l~~i~~~y~~~~  539 (784)
                      ++++++++..+    ....+.+|+  ..+.+.+++.++..++++..        .........+++++++.+.+.+....
T Consensus       157 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~--------~~~~~~~~~~~~~~l~~~~~~~~~~~  228 (366)
T c2qbyA_         157 ISFIGITNDVKFVDLLDPRVKSSLSEEEIIFPPYNAEELEDILTKR--------AQMAFKPGVLPDNVIKLCAALAAREH  228 (366)
T ss_dssp             EEEEEEESCGGGGGGCTTHHHHTTTTEEEEECCCCHHHHHHHHHHH--------HHHHBCSSCSCHHHHHHHHHHHHHTT
T ss_pred             EEEECCCCCHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHH--------HHHHCCCCCCCHHHHHHHHHHHHCCC
T ss_conf             8997138843566410122444201330246898989999999999--------97305678889899999999973169


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHC
Q ss_conf             81257876999999999998403887608970888676617
Q batch____       540 GVRGLEREISKLCRKAVKQLLLDKSLKHIEINGDNLHDYLG  580 (784)
Q Consensus       540 G~R~l~r~i~~i~r~~~~~~~~~~~~~~~~i~~~~i~~~l~  580 (784)
                      |.   -+....+++.+..........   .++.+++.+.+.
T Consensus       229 g~---~~~~~~~l~~~~~~a~~~~~~---~i~~~~i~~~l~  263 (366)
T c2qbyA_         229 GD---ARRALDLLRVSGEIAERMKDT---KVKEEYVYMAKE  263 (366)
T ss_dssp             CC---HHHHHHHHHHHHHHHHHTTCS---SCCHHHHHHHHH
T ss_pred             CC---HHHHHHHHHHHHHHHHHCCCC---CCCHHHHHHHHH
T ss_conf             99---899999999999999856898---558999999999