 |
Job Description | P00861 | Confidence | 21.95% | Date | Thu Jan 5 10:56:56 GMT 2012 |
Rank | 130 | Aligned Residues | 73 |
% Identity | 14% | Template | d1tb3a1 |
SCOP info | TIM beta/alpha-barrel
| FMN-linked oxidoreductases
| FMN-linked oxidoreductases
|
Resolution | 2.30 |
|
 |
  |   |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
. | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Q | I | A | A | L | K | Q | F | D | V | V | R | F | A | Q | K | A | C | S | N | I | H | I | L | R | L | M | R | E | Q | G | V | . |
K | V | D | S | V | S | L | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | I | E | R | A | L | A | A | G | Y | N | P | Q | T | H | P | D | D | I | V | F | T | A |
Query Conservation |   |
  |
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|
|
|   |   |   |   |
|
|   |   |
|   |   |   |
|   | . |
|   |
|
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |
|
|   |   |
|   |   |   |
|
|
|   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
| . | . | . | . | . | . | . |
|
|
|   |
|
|
Template Sequence |   |
N | D | L | S | L | L | Q | S | I | T | R | L | P | I | I | L | K | G | I | L | T | K | E | D | A | E | L | A | M | K | H | N | V | Q | G | I | V | V | S | N | H | G | G | R | Q | L | D | E | V | S | A | S | I | D | A | L | R | E | V | V | A | A | V | K | G | K | I | . |
. |
. |
. |
. |
. |
. |
E | V | Y | M | D | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |
|
| S |
|  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
| G | G | G | T | S | S |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | . | . | . | . | . | . | . |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
207 | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . |
  |
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | I | D | Q | A | T | L | E | R | V | S | E | L | Q | I |
Query Conservation |   |
  |   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |
|
|   |
|
|
|
|
|
|
|
Template Sequence |   |
G | V | R | T | G | T | D | V | L | K | A | L | A | L | G | A |
Template Known Secondary structure |   |
S |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|