Job Description P00861 Confidence 100.00% Date Thu Jan 5 10:56:56 GMT 2012 Rank 24 Aligned Residues 242 % Identity 23% Template d1hkva2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 2.6

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		D	A	Q	I	I	R	R	Q	I	A	A	L	K	Q	F	.	.	.	.	D	V	V	R	F	A	Q	K	A	C	S	N	I	H	I	L	R	L	M	R	E	Q	G	V	K	V	D	S	V	S	L	G	E	I	E	R	A	L	A	A	G	Y	N	P	Q	T	H	P	D	D	I	V	F	T	A	D	V	I	D	Q	A
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.																																														.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		D	E	D	D	F	R	S	R	C	R	E	T	A	A	A	F	G	S	G	A	N	V	H	Y	A	A	K	A	F	L	C	S	E	V	A	R	W	I	S	E	E	G	L	C	L	D	V	C	T	G	G	E	L	A	V	A	L	H	A	S	F	P	P	E	.	.	.	.	R	I	T	L	H	G	N	N	K	S	V	S
Template Known Secondary structure																	T	T	S	G	G	G	B				G	G	G	S													T							S										T	T			G	G	.	.	.	.	G						S	S
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.
		108	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.					.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																					.	.	.	.																																		.	.	.
Query SS confidence												.																					.	.	.	.																																		.	.	.
Query Sequence		T	L	E	R	V	S	E	L	Q	I	.	P	V	N	A	G	S	V	D	M	L	D	Q	L	G	Q	V	S	P	G	H	.	.	.	.	R	V	W	L	R	V	N	P	G	F	G	H	G	H	S	Q	K	T	N	T	G	G	E	N	S	K	H	G	I	W	Y	T	D	.	.	.	L	P	A	A	L	D	V	I	Q
Query Conservation												.																					.	.	.	.																																		.	.	.
Alig confidence												.																					.	.	.	.																																		.	.	.
Template Conservation
Template Sequence		E	L	T	A	A	V	K	A	G	V	G	H	I	V	V	D	S	M	T	E	I	E	R	L	D	A	I	A	G	E	A	G	I	V	Q	D	V	L	V	R	L	T	V	G	V	E	A	H	T	H	E	F	I	S	T	A	H	E	D	Q	K	F	G	L	S	V	A	S	G	A	A	M	A	A	V	R	R	V	F	A
Template Known Secondary structure										T								S															T												S						T						S	S			S	S	S	S			S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.									.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																			.																				.	.	.	.	.	.	.	.
Query SS confidence																			.																				.	.	.	.	.	.	.	.
Query Sequence		R	H	H	L	Q	L	V	G	I	H	M	H	I	G	S	G	V	.	D	Y	A	H	L	E	Q	V	C	G	A	M	V	R	Q	V	I	E	F	.	.	.	.	.	.	.	.	G	Q	D	L	Q	A	I	S	A	G	G	G	L	S	V	P	Y	Q	Q	G	E	E	A	V	D	T	E	H	Y	Y	G	L	W	N	A
Query Conservation																			.																				.	.	.	.	.	.	.	.
Alig confidence																			.																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	D	H	L	R	L	V	G	L	H	S	H	I	G	S	Q	I	F	D	V	D	G	F	E	L	A	A	H	R	V	I	G	L	L	R	D	V	V	G	E	F	G	P	E	K	T	A	Q	I	A	T	V	D	L	G	G	G	L	G	I	S	Y	L	P	S	D	D	P	P	P	I	A	E	L	A	A	K	L	G	T
Template Known Secondary structure			S	S																	S																										S	T	T										B				S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		251	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		A	R	E	Q	I	A	R	H	L	G	H	.	P	V	K	L	E	I	E	P	G	R	F	L	V	A	Q	S
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		I	V	S	D	E	S	T	A	V	G	L	P	T	P	K	L	V	V	E	P	G	R	A	I	A	G	P	G
Template Known Secondary structure									T	T	T								B			S					S	T	T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions