Job Description P00861 Confidence 100.00% Date Thu Jan 5 10:56:56 GMT 2012 Rank 21 Aligned Residues 231 % Identity 18% Template d1d7ka2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 2.10

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		D	A	Q	I	I	R	R	Q	I	A	A	L	K	Q	F	.	.	.	D	V	V	R	F	A	Q	K	A	C	S	N	I	H	I	L	R	L	M	R	E	Q	G	V	K	V	D	S	V	S	L	G	E	I	E	R	A	L	A	A	G	Y	N	P	Q	T	H	P	D	D	I	V	F	T	A	D	V	I	D	Q	A	T
Query Conservation																	.	.	.
Alig confidence																	.	.	.							.																																							.	.	.	.
Template Conservation																										.																																							.	.	.	.
Template Sequence		D	L	G	D	I	L	K	K	H	L	R	W	L	K	A	L	P	R	V	T	P	F	Y	A	.	V	C	N	D	S	K	A	I	V	K	T	L	A	A	T	G	T	G	F	D	C	A	S	K	T	E	I	Q	L	V	Q	S	L	G	V	P	P	E	.	.	.	.	R	I	I	Y	A	N	P	C	K	Q	V	S	Q
Template Known Secondary structure																		T	T							.																T							S									T	T	T			G	G	.	.	.	.	G						S	S
Template Predicted Secondary structure																										.																																							.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.					.	.	.	.	110	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	E	R	V	S	E	L	Q	I	.	P	V	N	A	G	S	V	D	M	L	D	Q	L	G	Q	V	S	P	G	H	R	V	W	L	R	V	N	P	G	F	G	H	G	H	S	Q	K	T	N	T	G	G	E	N	S	K	H	G	I	W	Y	T	D	L	P	A	A	L	D	V	I	Q	R	H	H	L	Q	L	V	G
Query Conservation											.
Alig confidence											.																																				.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.
Template Sequence		I	K	Y	A	A	N	N	G	V	Q	M	M	T	F	D	S	E	V	E	L	M	K	V	A	R	A	H	P	K	A	K	L	V	L	R	I	A	T	D	D	S	K	A	V	C	.	.	.	.	.	.	R	L	S	V	K	F	G	A	T	L	R	T	S	R	L	L	L	E	R	A	K	E	L	N	I	D	V	V	G
Template Known Secondary structure								T	T								S												T	T							B							S			.	.	.	.	.	.		S			S	S		B															T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.							.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		I	H	M	H	I	G	S	G	V	D	Y	A	H	L	E	.	.	.	.	Q	V	C	G	A	M	V	R	Q	V	I	E	F	G	Q	D	L	Q	A	I	S	A	G	G	G	L	S	V	P	Y	Q	Q	G	E	E	A	V	D	T	E	H	Y	Y	G	L	W	N	A	A	R	E	Q	I	A	R	H	L	G	H	P	V
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.																															.	.	.																								.
Template Conservation																																																			.	.	.																								.
Template Sequence		V	S	F	H	V	G	S	G	C	T	D	P	E	T	F	V	Q	A	I	S	D	A	R	C	V	F	D	M	G	A	E	V	G	F	S	M	Y	L	L	D	I	G	G	G	F	P	G	S	E	.	.	.	D	V	K	L	K	F	E	E	I	T	G	V	I	N	P	A	L	D	K	Y	F	P	S	.	D	S	G	V
Template Known Secondary structure								T	T		S		T																					T														S	S	S	.	.	.		S	S	S																	S		G	.	G	G
Template Predicted Secondary structure																																																			.	.	.																								.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	E	I	E	P	G	R	F	L	V	A	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	I	A	E	P	G	R	Y	Y	V	A	S	A
Template Known Secondary structure								S					T	T
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions