Job Description P00861 Confidence 99.76% Date Thu Jan 5 10:56:56 GMT 2012 Rank 51 Aligned Residues 179 % Identity 16% Template d1bd0a2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 1.60

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																		.	.	.	.												.	.	.	.														.
Query SS confidence																		.	.	.	.												.	.	.	.														.
Query Sequence		Y	D	A	Q	I	I	R	R	Q	I	A	A	L	K	Q	F	.	.	.	.	D	V	V	R	F	A	Q	K	A	C	S	.	.	.	.	N	I	H	I	L	R	L	M	R	E	Q	G	V	.	K	V	D	S	V	S	L	G	E	I	E	R	A	L	A	A	G	Y	N	P	Q	T	H	P	D	D	I	V	F	T	A
Query Conservation																		.	.	.	.												.	.	.	.														.
Alig confidence																		.	.	.	.												.	.	.	.														.																					.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.
Template Sequence		V	D	L	D	A	I	Y	D	N	V	E	N	L	R	R	L	L	P	D	D	T	H	I	M	A	V	V	K	A	N	A	Y	G	H	G	D	V	Q	V	A	R	T	A	L	E	A	G	A	S	R	L	A	V	A	F	L	D	E	A	L	A	L	R	E	K	G	I	E	A	.	.	.	.	.	P	I	L	V	L	G
Template Known Secondary structure																		S		T	T													T	T													T							S	S										T	T			S	.	.	.	.	.						S
Template Predicted Secondary structure																																																																							.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80						.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		D	V	I	D	Q	A	T	L	E	R	V	S	E	L	Q	I	P	V	N	A	G	S	V	D	M	L	D	Q	L	G	Q	V	S	P	G	H	R	V	W	L	R	V	N	P	G	F	G	H	G	H	S	Q	K	T	N	T	G	G	E	N	S	K	H	G	I	.	W	Y	T	D	L	P	A	A	L	D	V	I	Q	R
Query Conservation																																																																			.
Alig confidence				.																																	.																.	.	.	.	.	.	.	.	.	.					.
Template Conservation				.																																	.																.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	.	R	P	A	D	A	A	L	A	A	Q	Q	R	I	A	L	T	V	F	R	S	D	W	L	E	E	A	S	A	L	Y	S	G	.	P	F	P	I	H	F	H	L	K	M	D	T	G	M	G	.	.	.	.	.	.	.	.	.	.	R	L	G	V	K	D	E	E	E	T	K	R	I	V	A	L	I	E	R
Template Known Secondary structure				.		G	G	G							T	T																					.	S	S								B		S	S	S		.	.	.	.	.	.	.	.	.	.	S	S	S	B		S
Template Predicted Secondary structure				.																																	.																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.											.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
			181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure		.																	.	.
Query SS confidence		.																	.	.
Query Sequence		.	H	H	L	Q	L	V	G	I	H	M	H	I	G	S	G	V	.	.	D	Y	A	H	L	E	Q	V	C	G	A	M	V	R	Q	V	I	E	F	G	Q	D	L	Q	A	I	S	A	G	G
Query Conservation		.																	.	.
Alig confidence		.																	.	.
Template Conservation
Template Sequence		H	P	H	F	V	L	E	G	L	Y	T	H	F	A	T	A	D	E	V	N	T	D	Y	F	S	Y	Q	Y	T	R	F	L	H	M	L	E	W	L	P	S	R	P	P	L	V	H	C	A	N
Template Known Secondary structure		S	T	T											S	S	T	T	S	S																	T	T		S	S			S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions