 |
Job Description | P00861 | Confidence | 40.27% | Date | Thu Jan 5 10:56:56 GMT 2012 |
Rank | 77 | Aligned Residues | 104 |
% Identity | 13% | Template | c3nsnA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:n-acetylglucosaminidase; |
PDBTitle: crystal structure of insect beta-n-acetyl-d-hexosaminidase ofhex12 complexed with tmg-chitotriomycin
|
Resolution | 2.10 Å |
|
 |
  |   |
123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
. | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | |
|
|
. | . | . | . | 190 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  | . | . | . |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
S | V | D | M | L | D | Q | L | G | Q | V | S | P | G | H | R | V | W | . |
L | R | V | N | P | G | F | G | H | G | H | S | Q | K | T | N | T | G | G | E | N | S | K | H | G | . |
. |
. |
. |
. |
. |
. |
I | W | Y | T | D | L | P | A | A | L | D | V | I | Q | R | H | H | L | Q | L | . |
. |
. |
V | G | I | H | M | H |
Query Conservation |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   | . |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
| . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
| . | . | . |   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|   |   |
|
|   |
|
|   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |   |   |   |
|
|
|
|   |   |
|
|   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|
|   |
|
|   |   |
|
|
|   |
|
|
|
|
|
|   |
|
|
|
Template Sequence |   |
S | I | E | S | I | K | R | T | I | E | A | M | A | A | V | K | L | N | T | F | H | W | H | I | T | D | S | Q | S | F | P | F | V | T | T | K | R | P | N | L | Y | K | F | G | A | L | S | P | Q | K | V | Y | T | K | A | A | I | R | E | V | V | R | F | G | L | E | R | G | V | R | V | L | P | E | F | D | A | P | A | H |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
|
|
| S | S |
|
|
| B |
|
| S | S | S | T |  |  |  |  |  |  | S | S | S | S | S | S |
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  | S | B | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
224 | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . |
  |
  |   |
192 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | G | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | V | D | Y | A | H | L | E | Q | V | C | G | A | M | V | R | Q | V | I | E | F | G | Q | D | L | Q | A | I | S | A | G | G |
Query Conservation |   |
  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|
|
Alig confidence |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |
|
|   |   |   |   |   |
|
|
|
|
Template Sequence |   |
V | G | E | G | W | Q | D | T | D | L | T | V | C | F | K | A | E | P | W | K | S | Y | C | V | E | P | P | C | G | Q | L | N | P | T | K | D | E | L | Y | Q | Y | L | E | D | I | Y | S | D | M | A | E | V | F | D | T | T | D | I | F | H | M | G | G |
Template Known Secondary structure |   |
|
| T | T |
| T | T | T | T |
|  |  |
| T | T |
| S | S | G | G | G | T |
| S | S | S | S |
|
|  |  |
| T | T |
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
| S |
|  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
304 | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|