Job Description P00861 Confidence 100.00% Date Thu Jan 5 10:56:56 GMT 2012 Rank 12 Aligned Residues 357 % Identity 18% Template c3n29A_ PDB info PDB header:lyase Chain: A: PDB Molecule:carboxynorspermidine decarboxylase; PDBTitle: crystal structure of carboxynorspermidine decarboxylase complexed with2 norspermidine from campylobacter jejuni Resolution 1.90 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		A	E	F	G	C	P	V	W	V	Y	D	A	Q	I	I	R	R	Q	I	A	A	L	K	Q	F	.	.	.	.	.	D	V	V	R	F	A	Q	K	A	C	S	N	I	H	I	L	R	L	M	R	E	Q	G	V	K	V	D	S	V	S	L	G	E	I	E	R	A	L	A	A	G	Y	N	P	Q	T	H	P	D	D
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.																																						.	.							.	.	.	.
Template Conservation																																																																					.	.							.	.	.	.
Template Sequence		E	K	I	Q	T	P	A	Y	I	L	E	E	D	K	L	R	K	N	C	E	L	L	A	S	V	G	E	K	S	G	A	K	V	L	L	A	L	K	G	F	A	F	S	G	A	M	K	I	V	G	E	Y	L	K	G	C	T	C	S	G	L	W	E	A	K	F	A	.	.	K	E	Y	M	D	K	.	.	.	.	E
Template Known Secondary structure		T	T			S	S																															T	T	T				G	G	G								S						S	S								.	.				T		S	.	.	.	.
Template Predicted Secondary structure																																																																					.	.							.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.					.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	F	T	A	D	V	I	D	Q	A	T	L	E	R	V	S	E	L	Q	I	P	V	N	A	G	S	V	D	M	L	D	Q	L	G	Q	V	S	P	G	H	R	V	W	L	R	V	N	P	G	F	G	H	G	H	S	Q	K	T	N	T	G	G	E	N	S	K	H	G	I	W	Y	T	D	L	P	A	A	L	D
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.															.
Template Sequence		I	H	T	Y	S	P	A	F	K	E	D	E	I	G	E	I	A	S	L	S	H	H	I	V	F	N	S	L	A	Q	F	H	K	F	Q	S	K	T	Q	K	N	S	L	G	L	R	C	N	V	E	F	S	G	R	Y	.	.	.	.	.	.	.	.	.	.	S	R	L	G	I	R	A	K	D	F	E	N	V	D	.
Template Known Secondary structure							S	S														S					S	S								G	G	G		T	T	S						B							T	T	.	.	.	.	.	.	.	.	.	.			S	S	B		G	G	G	G	T	T			.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.											.	.	.	.	.	.	.	140	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	Q	R	H	H	L	Q	L	V	G	I	H	M	H	I	G	S	G	V	D	Y	A	H	L	E	Q	V	C	G	A	M	V	R	Q	V	I	E	F	G	Q	D	L	Q	A	I	S	A	G	G	G	L	S	V	P	Y	Q	Q	G	E	E	A	V	D	T	E	H	Y	Y	G	L	W	N	A	A	R	E	Q	I	A
Query Conservation
Alig confidence		.	.	.	.	.																																																				.	.	.	.																				.
Template Conservation		.	.	.	.	.																																																				.	.	.	.																				.
Template Sequence		.	.	.	.	.	L	N	A	I	E	G	L	H	F	H	A	L	C	E	E	S	A	D	A	L	E	A	V	L	K	V	F	E	E	K	F	G	K	W	I	G	Q	M	K	W	V	N	F	G	G	G	H	H	I	T	K	.	.	.	.	K	G	Y	D	V	E	K	L	I	A	L	C	K	N	F	S	D	K	Y	.
Template Known Secondary structure		.	.	.	.	.		T	T										S	S	B																	G	G	G	T	T	T		S						S		B		T	T	S	.	.	.	.	T	T																		.
Template Predicted Secondary structure		.	.	.	.	.																																																				.	.	.	.																				.
Template SS confidence
							157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.							.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																																																																.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.
Query Sequence		R	H	L	G	H	P	V	K	L	E	I	E	P	G	R	F	L	V	A	Q	S	G	V	L	I	T	Q	V	R	S	V	K	Q	M	G	S	R	H	F	V	L	V	D	A	G	F	N	D	L	M	R	P	A	M	Y	G	S	Y	H	H	I	S	.	.	.	.	.	.	A	L	A	A	D	G	R	S	L	E	H	A
Query Conservation																																																																.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																																										.	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	G	V	Q	V	Y	L	E	P	G	E	A	V	G	W	Q	T	G	N	L	V	A	S	V	V	D	I	I	E	N	E	K	Q	I	A	I	L	D	T	S	S	E	A	H	M	P	D	T	I	I	M	P	Y	T	S	E	V	L	N	A	R	I	L	A	T	R	E	N	E	K	I	S	D	L	K	E
Template Known Secondary structure		.	.	.	.	.	T								S					T	T	S													S	S	S						S	S						S						T	T					B	T	T							T	T			B						T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		P	T	V	E	T	V	V	A	G	P	L	C	E	S	G	D	V	F	T	Q	Q	E	G	G	N	V	E	T	R	A	L	P	E	V	K	A	G	D	Y	L	V	L	H	D	T	G	A	Y	G	A	S	M	S	S	N	Y	N	S	R	P	L	L	P	E	V	L	F	D	.	N	G	Q	A	R	L	I	R	R	R	Q
Query Conservation																																																																						.
Alig confidence																							.	.	.	.	.	.	.																																									.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence		N	E	F	A	Y	L	L	T	G	N	T	C	L	A	G	D	V	M	G	E	Y	.	.	.	.	.	.	.	A	F	D	K	K	L	K	I	G	D	K	I	V	F	L	D	Q	I	H	Y	T	I	V	K	N	T	T	F	N	G	I	R	L	P	N	L	M	L	L	D	H	K	N	E	L	Q	M	I	R	E	F	S
Template Known Secondary structure		T									S	S	S		T	T							.	.	.	.	.	.	.			S	S				T	T						S	S		S	S	S	S	G	G	G				G	G	G											T	T	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.								.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	E	E	L	L	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	K	D	Y	S	L	R	N
Template Known Secondary structure		T					T	T
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.	380	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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