Job Description P00861 Confidence 100.00% Date Thu Jan 5 10:56:56 GMT 2012 Rank 14 Aligned Residues 338 % Identity 18% Template c3mt1B_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative carboxynorspermidine decarboxylase protein; PDBTitle: crystal structure of putative carboxynorspermidine decarboxylase2 protein from sinorhizobium meliloti Resolution 2.50 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.
Query SS confidence																									.	.	.	.	.
Query Sequence		F	G	C	P	V	W	V	Y	D	A	Q	I	I	R	R	Q	I	A	A	L	K	Q	F	.	.	.	.	.	D	V	V	R	F	A	Q	K	A	C	S	N	I	H	I	L	R	L	M	R	E	Q	G	V	K	V	D	S	V	S	L	G	E	I	E	R	A	L	A	A	G	Y	N	P	Q	T	H	P	D	D	I	V
Query Conservation																									.	.	.	.	.
Alig confidence																									.	.	.	.	.																																												.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.
Template Sequence		I	E	T	P	Y	Y	L	I	D	K	A	K	L	T	R	N	X	E	R	I	A	H	V	R	E	K	S	G	A	K	A	L	L	A	L	K	C	F	A	T	W	S	V	F	D	L	X	R	D	Y	X	D	G	T	T	S	S	S	L	F	E	V	R	L	G	R	E	R	F	G	K	.	.	.	.	.	.	E	T	H
Template Known Secondary structure				S	S																															T	T	T				G	G	G						T	T							S	S											T		S	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.							.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	A	D	V	I	D	Q	A	T	L	E	R	V	S	E	L	Q	I	P	V	N	A	G	S	V	D	M	L	D	Q	L	G	Q	V	S	P	G	H	R	V	W	L	R	V	N	P	G	F	G	H	G	H	S	Q	K	T	N	T	G	G	E	N	S	K	H	G	I	W	Y	T	D	L	P	A	A	L	D	V	I
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Sequence		A	Y	S	V	A	Y	G	D	N	E	I	D	E	V	V	S	H	A	D	K	I	I	F	N	S	I	S	Q	L	E	R	F	A	D	K	A	A	G	I	A	R	G	L	R	L	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	L	G	E	W	D	V	P	K	V	E	R	V	.	.	.
Template Known Secondary structure					S	S														S					S	S								T	T	T	T	T	T	S						B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	B								T	T	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		Q	R	H	H	L	Q	L	V	G	I	H	M	H	I	G	S	G	V	.	D	Y	A	H	L	E	Q	V	C	G	A	M	V	R	Q	V	I	E	F	G	Q	D	L	Q	A	I	S	A	G	G	G	L	S	V	P	Y	Q	Q	G	E	E	A	V	D	T	E	H	Y	Y	G	L	W	N	A	A	R	E	Q	I	A	R
Query Conservation																				.
Alig confidence		.	.	.																.																																					.	.	.	.																				.	.
Template Conservation		.	.	.																																																					.	.	.	.																				.	.
Template Sequence		.	.	.	X	D	R	I	N	G	F	X	I	H	N	N	C	E	N	K	D	F	G	L	F	D	R	X	L	G	E	I	E	E	R	F	G	A	L	I	A	R	V	D	W	V	S	L	G	G	G	I	H	F	T	G	.	.	.	.	D	D	Y	P	V	D	A	F	S	A	R	L	R	A	F	S	D	R	Y	.	.
Template Known Secondary structure		.	.	.	T	T	S										S	S	B																								S	S						S		B		T	T	S	.	.	.	.	T	T																		.	.
Template Predicted Secondary structure		.	.	.																																																					.	.	.	.																				.	.
Template SS confidence
					153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	G	H	P	V	K	L	E	I	E	P	G	R	F	L	V	A	Q	S	G	V	L	I	T	Q	V	R	S	V	K	Q	M	G	S	R	H	F	V	L	V	D	A	G	F	N	D	L	M	R	P	A	M	Y	G	S	Y	H	H	I	S	A	L	A	A	D	G	R	S	L	E	H	A	P	T	V	E	T	V	V
Query Conservation
Alig confidence		.	.	.	.																													.	.																													.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																													.	.																													.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	G	V	Q	I	Y	L	E	P	G	E	A	S	I	T	K	S	T	T	L	E	V	T	V	L	D	T	L	Y	.	.	N	K	N	L	A	I	V	D	S	S	I	E	A	H	X	L	D	L	L	I	Y	R	E	T	A	K	V	L	.	.	.	.	.	.	.	.	P	N	E	G	S	H	S	Y	X	I
Template Known Secondary structure		.	.	.	.	T								S					T	T														.	.								S														T						S	.	.	.	.	.	.	.	.	S			S	S
Template Predicted Secondary structure		.	.	.	.																													.	.																													.	.	.	.	.	.	.	.
Template SS confidence
						224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.									280	.	.	.	.	.	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		A	G	P	L	C	E	S	G	D	V	F	T	Q	Q	E	G	G	N	V	E	T	R	A	L	P	E	V	K	A	G	D	Y	L	V	L	H	D	T	G	A	Y	G	A	S	M	S	S	N	Y	N	S	R	P	L	L	P	E	V	L	F	D	.	N	G	Q	A	R	L	I	R	R	R	Q	T	I	E	E	L	L	A
Query Conservation																																																															.
Alig confidence																.	.	.	.	.	.	.																																									.								.
Template Conservation																.	.	.	.	.	.	.																																																	.
Template Sequence		C	G	K	S	C	L	A	G	D	V	F	G	E	F	.	.	.	.	.	.	.	R	F	A	E	E	L	K	V	G	D	R	I	S	F	Q	D	A	A	G	Y	T	X	V	K	K	N	W	F	N	G	V	K	X	P	A	I	A	I	R	E	L	D	G	S	V	R	T	V	.	R	E	F	T	Y	A	D	Y	E	Q
Template Known Secondary structure				S	S	S		T	T							.	.	.	.	.	.	.			S	S				T	T						S	S			T	T	T	G	G	G				G	G	G											T	T	S						.
Template Predicted Secondary structure																.	.	.	.	.	.	.																																																	.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.								.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.
		417
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		363

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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