Job Description P00861 Confidence 26.68% Date Thu Jan 5 10:56:56 GMT 2012 Rank 113 Aligned Residues 140 % Identity 14% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		60	.	.	.	.	.	.	.	.	.	70		.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.
Predicted Secondary structure													.					.	.	.	.																																												.							.	.	.	.	.	.	.	.	.	.
Query SS confidence													.					.	.	.	.																																												.							.	.	.	.	.	.	.	.	.	.
Query Sequence		H	I	L	R	L	M	R	E	Q	G	V	.	K	V	D	S	.	.	.	.	V	S	L	G	E	I	E	R	A	L	A	A	G	Y	N	P	Q	T	H	P	D	D	I	V	F	T	A	D	V	I	D	Q	A	T	L	E	R	V	S	E	L	Q	I	.	P	V	N	A	G	S	.	.	.	.	.	.	.	.	.	.
Query Conservation													.					.	.	.	.																																												.							.	.	.	.	.	.	.	.	.	.
Alig confidence													.					.	.	.	.													.	.																	.													.							.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.																	.
Template Sequence		Q	I	A	K	A	L	D	N	F	G	V	D	Y	I	E	L	T	S	P	V	A	S	E	Q	S	R	Q	D	C	E	A	I	.	.	C	K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	.	M	D	D	A	R	V	A	V	E	T	G	V	D	G	V	D	V	V	I	G	T	S	Q	Y	L	R	K	Y	S
Template Known Secondary structure											T		S							G	G	G												.	.		T	S			S	S								S		.										T	T		S								G	G	G
Template Predicted Secondary structure																																		.	.																	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
								124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.																				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	V	D	M	L	D	Q	L	G	Q	V	S	P	G	H	R	V	W	L	R	V	N	P	G	F	G	H	G	H	S	Q	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	G	G	E	N	S	K	H	G	I	W	Y	T	D	L	P	A	A	L	D	V	I
Query Conservation		.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.
Template Conservation																																																															.	.	.	.	.
Template Sequence		H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	G	V	N	R	V	G	I	A	D	T	V	G	.	.	.	.	.	C	A	T	P	R	Q	V	Y	D	L	I	R	T	L
Template Known Secondary structure																					T	T								T	T	G	G	G	S																		S							S	S	S	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	H	H	L	Q	L	V	G	I	H	M	H	I	G	S	G	V	D	Y	A	H	L	E	Q	V	C	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	V	V	S	C	D	I	E	C	H	F	H	N	D	T	G	M	A	I	A	N	A	Y	C	A	L	E	A
Template Known Secondary structure						S	S							B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions