Job Description P00861 Confidence 99.93% Date Thu Jan 5 10:56:56 GMT 2012 Rank 44 Aligned Residues 282 % Identity 20% Template c3hurA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from oenococcus oeni Resolution 2.50 Å

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		26	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.		.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure							.																	.	.	.										.	.	.	.														.			.
Query SS confidence							.																	.	.	.										.	.	.	.														.			.
Query Sequence		C	P	V	W	V	.	Y	D	A	Q	I	I	R	R	Q	I	A	A	L	K	Q	F	.	.	.	D	V	V	R	F	A	Q	K	A	.	.	.	.	C	S	N	I	H	I	L	R	L	M	R	E	Q	.	G	V	.	K	V	D	S	V	S	L	G	E	I	E	R	A	L	A	A	G	Y	N	P	Q	T	H	P	D
Query Conservation							.																	.	.	.										.	.	.	.														.			.
Alig confidence							.																	.	.	.										.	.	.	.														.			.																					.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		R	P	T	W	V	S	V	D	L	D	A	A	A	H	N	L	Q	E	I	R	E	W	T	K	A	K	K	V	Y	A	V	L	K	A	D	G	Y	G	L	G	A	I	P	L	A	K	A	F	Q	E	T	A	S	A	D	A	L	I	V	S	N	L	D	E	A	L	E	L	R	Q	A	D	L	T	L	.	.	.	.	.
Template Known Secondary structure																									T		S													T												T	T			S					S											T	T			S	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		D	I	V	F	T	A	D	V	I	D	Q	A	T	L	E	R	V	S	E	L	Q	I	P	V	N	A	G	S	V	D	M	L	D	Q	L	G	Q	V	S	P	G	H	R	V	W	L	R	V	N	P	G	F	G	H	G	H	S	Q	K	T	N	T	G	G	E	N	S	K	H	G	I	.	W	Y	T	D	L	P	A	A
Query Conservation																																																																									.
Alig confidence										.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation										.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	I	W	V	L	G	A	W	.	D	Y	S	D	L	K	L	F	I	D	H	D	I	V	I	T	I	P	S	L	A	W	L	Q	N	L	P	D	F	E	G	T	L	K	V	S	L	A	I	D	T	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	I	G	F	D	K	A	D	E	I	S	A	A
Template Known Secondary structure						S	S			.		G	G	G							T	T													T					S	S								B			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S	B
Template Predicted Secondary structure										.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.															.	.	.	.	.	.	.	140	.	.	.	.	.	.
		175	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200						.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure						.																							.	.	.	.	.
Query SS confidence						.																							.	.	.	.	.
Query Sequence		L	D	V	I	.	Q	R	H	H	L	Q	L	V	G	I	H	M	H	I	G	S	G	V	D	Y	A	H	.	.	.	.	.	L	E	Q	V	C	G	A	M	V	R	Q	V	I	E	F	G	Q	D	L	Q	A	I	S	A	G	G	G	L	S	V	P	Y	Q	Q	G	E	E	A	V	D	T	E	H	Y	Y	G	L	W
Query Conservation						.																							.	.	.	.	.
Alig confidence						.																							.	.	.	.	.																																											.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		K	K	I	I	D	K	N	P	Q	L	D	L	F	S	V	Y	T	H	F	A	T	A	D	E	A	G	E	K	S	K	A	Y	F	E	E	Q	L	R	R	W	Q	E	L	T	I	N	Q	G	F	D	P	S	L	F	S	M	A	N	S	A	T	C	I	W	H	H	D	D	P	R	I	S	F	A	.	.	.	.	.	.
Template Known Secondary structure									T	T											T	T	T	T	S		S																			T	T	S				G	G	G												T	T	T		T	T	S			S	.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.																		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.																290	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	A	R	E	Q	I	A	R	H	L	G	H	P	V	K	L	E	I	E	P	G	R	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	Q	S	G	V	L	I	T	Q	V	R	S	V	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	G	S	R	H	F	V
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	R	P	G	Q	L	I	S	G	V	N	V	S	N	G	E	L	K	M	P	P	N	L	H	L	E	R	I	F	S	V	C	S	E	I	A	D	V	R	F	V	K	K	D	Q	S	L	S	Y	G	A	S	E	R	M	P	E	D	G	Y	V	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G	G	T			T	T	T	T	S	S				T	T																					T	T		B	S	S	T	T		S		B		S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	D	A	G	F	N	D	L	M	R	P	A	M	Y	G	S	Y	H	H	I	S	A	L	A	A	D	G	R	S	L	E	H	A	P	T	V	E	T	V	V	A	G	P	L	C	E	S	G	D	V	F	T	Q	Q	E	G	G	N	V	E	T	R	A	L	P	E	V	K	A	G	D	Y	L	V	L	H
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.														.	.										.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.														.	.										.	.	.	.	.	.	.	.
Template Sequence		T	L	P	F	G	Y	N	D	G	W	L	R	R	M	Q	K	S	S	V	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	K	R	M	P	I	I	G	R	I	T	M	.	.	D	Q	T	M	V	K	L	D	R	.	.	.	.	.	.	.	.	K	Y	P	I	G	T	R	V	T	L	I
Template Known Secondary structure				S			T	T		G	G	G	G	G									.	.	.	.	.	.	.	.	.	.	.	.	.	T	T					B		S				S	.	.	S							S	S	.	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.														.	.										.	.	.	.	.	.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.														.	.	.	.	.	310	.	.	.	.	.	.	.			.	.	320	.	.	.	.	.	.									.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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