Job Description P00861 Confidence 99.53% Date Thu Jan 5 10:56:56 GMT 2012 Rank 56 Aligned Residues 187 % Identity 12% Template c3cpgA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an unknown protein from bifidobacterium2 adolescentis Resolution 1.71 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.															.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.																		.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.																		.	.	.	.	.	.	.	.	.
Query Sequence		D	A	Q	I	I	R	R	Q	I	A	A	L	K	Q	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	R	F	A	Q	K	A	C	S	N	I	H	I	L	R	L	M	R	E	Q	G	V	.	K	V	D	S	V	S	L	G	E	I	E	R	A	L	A	A	G	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.																		.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.											.													.																		.	.	.	.	.	.	.	.	.
Template Conservation																																										.
Template Sequence		R	A	R	E	I	T	D	G	V	H	R	V	L	D	R	I	A	A	A	E	E	Q	A	G	R	E	A	G	S	V	R	L	L	A	A	T	K	T	R	D	.	I	G	E	I	X	A	A	I	D	A	G	V	R	X	I	G	E	N	R	P	Q	E	V	T	A	K	A	E	G	L	A	R	R	C	A	E	R	G	F
Template Known Secondary structure																								T	T			T	T	S	S							T	T			.										T	T							S																			T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
				88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	Y	N	P	Q	T	H	P	D	D	I	V	F	T	A	D	V	I	D	Q	A	T	L	E	R	V	S	E	L	Q	I	P	V	N	A	G	S	V	D	M	L	D	Q	L	G	Q	V	S	P	G	H	R	V	W	L	R	V	N	P	G	F	G	H	G	H	S	Q	K	T	N	T	G	G	E	N	S	K	H	G
Query Conservation		.	.
Alig confidence		.	.																																																																			.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.
Template Sequence		S	L	G	V	A	A	A	E	H	I	P	F	H	L	I	G	Q	L	Q	S	N	K	I	G	K	V	L	P	V	V	D	T	I	E	S	V	D	S	I	D	L	A	E	K	I	S	R	R	A	V	A	R	G	I	T	V	G	V	L	L	E	V	N	E	S	G	E	E	.	.	.	.	.	.	.	.	S	K	S	G
Template Known Secondary structure																	S				G	G	G					T	T	T		S																						T									B			S	S		T	.	.	.	.	.	.	.	.	T	S	S	S
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.									.	.	170	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.								.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																	.																																			.	.	.	.	.	.	.
Query SS confidence																	.																																			.	.	.	.	.	.	.
Query Sequence		I	W	Y	T	D	L	P	A	A	L	D	V	I	Q	R	.	H	H	L	Q	L	V	G	I	H	M	H	I	G	S	G	V	D	Y	A	H	L	E	Q	V	C	G	A	M	V	R	Q	V	I	E	.	.	.	.	.	.	.	F	G	Q	D	L	Q	A	I	S	A	G	G	G
Query Conservation																	.																																			.	.	.	.	.	.	.
Alig confidence																	.																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	D	P	A	H	A	I	R	I	A	Q	K	I	G	T	L	D	G	I	E	L	Q	G	L	X	T	I	G	A	H	V	H	D	E	T	V	I	R	R	G	F	S	H	L	R	K	T	R	D	L	I	L	A	S	G	E	P	G	T	D	R	C	R	E	L	S	X	G	X	T
Template Known Secondary structure		B		G	G	G										T		T	T													S	S																									T	T		T	T									T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions