Job Description P00861 Confidence 100.00% Date Thu Jan 5 10:56:56 GMT 2012 Rank 11 Aligned Residues 354 % Identity 18% Template c3btnA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:antizyme inhibitor 1; PDBTitle: crystal structure of antizyme inhibitor, an ornithine2 decarboxylase homologous protein Resolution 2.05 Å

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		17	.	.	20	.	.	.	.									.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.																							.	.	.
Query SS confidence										.	.	.	.	.	.	.	.																							.	.	.
Query Sequence		L	L	R	L	P	A	E	F	.	.	.	.	.	.	.	.	G	C	P	V	W	V	Y	D	A	Q	I	I	R	R	Q	I	A	A	L	K	Q	F	.	.	.	D	V	V	R	F	A	Q	K	A	C	S	N	I	H	I	L	R	L	M	R	E	Q	G	V	K	V	D	S	V	S	L	G	E	I	E	R	A	L	A
Query Conservation										.	.	.	.	.	.	.	.																							.	.	.
Alig confidence										.	.	.	.	.	.	.	.																							.	.	.
Template Conservation
Template Sequence		L	G	N	V	I	D	N	Y	V	Y	E	H	T	L	T	G	K	N	A	F	F	V	G	D	L	G	K	I	V	K	K	H	S	Q	W	Q	T	V	V	A	Q	I	K	P	F	Y	T	V	K	C	N	S	T	P	A	V	L	E	I	L	A	A	L	G	T	G	F	A	C	S	S	K	N	E	M	A	L	V	Q	E
Template Known Secondary structure																S	S																								T	T							G	G	G														T						S	S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		A	G	Y	N	P	Q	T	H	P	D	D	I	V	F	T	A	D	V	I	D	Q	A	T	L	E	R	V	S	E	L	Q	I	.	P	V	N	A	G	S	V	D	M	L	D	Q	L	G	Q	V	S	P	G	H	R	V	W	L	R	V	N	P	G	F	G	H	G	H	S	Q	K	T	N	T	G	G	E	N	S	K	H
Query Conservation																																		.
Alig confidence								.	.	.	.																							.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	V	S	P	E	.	.	.	.	N	I	I	F	T	S	P	C	K	Q	V	S	Q	I	K	Y	A	A	K	V	G	V	N	I	M	T	C	D	N	E	I	E	L	K	K	I	A	R	N	H	P	N	A	K	V	L	L	H	I	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	M	K	F
Template Known Secondary structure		T	T			G	G	.	.	.	.	G						S	S													T								S												T	T							B			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.															.	.	160	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																								.	.	.	.
Query SS confidence																																								.	.	.	.
Query Sequence		G	I	W	Y	T	D	L	P	A	A	L	D	V	I	Q	R	H	H	L	Q	L	V	G	I	H	M	H	I	G	S	G	V	D	Y	A	H	L	E	.	.	.	.	Q	V	C	G	A	M	V	R	Q	V	I	E	F	G	Q	D	L	Q	A	I	S	A	G	G	G	L	S	V	P	Y	Q	Q	G	E	E	A	V	D
Query Conservation																																								.	.	.	.
Alig confidence																																								.	.	.	.																															.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.
Template Sequence		G	T	T	L	K	N	C	R	H	L	L	E	C	A	K	E	L	D	V	Q	I	I	G	V	K	F	H	V	S	S	A	C	K	E	Y	Q	V	Y	V	H	A	L	S	D	A	R	C	V	F	D	M	A	G	E	F	G	F	T	M	N	M	L	D	I	G	G	G	F	T	G	T	E	.	.	.	.	.	.	I	Q
Template Known Secondary structure			B																T												T	T				T	T																			T	T										S				S			.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.							.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	H	Y	Y	G	L	W	N	A	A	R	E	Q	I	A	R	H	L	G	H	P	V	K	L	E	I	E	P	G	R	F	L	V	A	Q	S	G	V	L	I	T	Q	V	R	S	V	K	Q	M	G	S	R	H	F	V	L	V	D	A	G	F	N	D	L	M	R	P	A	M	Y	G	S	Y	H	H	I	S	A	L
Query Conservation
Alig confidence																			.																																.	.																							.	.	.	.	.	.	.
Template Conservation																			.																																.	.																							.	.	.	.	.	.	.
Template Sequence		L	E	E	V	N	H	V	I	S	P	L	L	D	I	Y	F	P	.	E	G	S	G	I	Q	I	I	S	E	P	G	S	Y	Y	V	S	S	A	F	T	L	A	V	N	I	I	A	K	K	V	.	.	V	A	F	V	Y	Y	M	N	D	G	V	Y	G	S	F	A	S	K	L	S	T	I	.	.	.	.	.	.	.
Template Known Secondary structure																	S		.	T	T	S									S					T	T	T													.	.								S			T	T	T	T	T	G	G	G	G				.	.	.	.	.	.	.
Template Predicted Secondary structure																			.																																.	.																							.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.			.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		A	A	D	G	R	S	L	E	H	A	P	T	V	E	T	V	V	A	G	P	L	C	E	S	G	D	V	F	T	Q	Q	E	G	G	N	V	E	T	R	A	L	P	E	V	K	A	G	D	Y	L	V	L	H	D	T	G	A	Y	G	A	S	M	S	S	N	Y	N	S	R	P	L	L	P	E	V	L	F	D	.	N
Query Conservation																																																																																.
Alig confidence		.	.	.	.																												.	.	.	.	.	.	.																																									.
Template Conservation		.	.	.	.																												.	.	.	.	.	.	.
Template Sequence		.	.	.	.	P	E	V	H	K	K	P	L	F	T	S	S	L	W	G	P	S	C	D	E	L	D	Q	I	V	E	S	.	.	.	.	.	.	.	C	L	L	P	E	L	N	V	G	D	W	L	I	F	D	N	M	G	A	D	S	F	H	E	P	S	A	F	N	D	F	Q	R	P	A	I	Y	F	M	M	S	F
Template Known Secondary structure		.	.	.	.																T	T		S	T	T							.	.	.	.	.	.	.								T	T						S	S			S	S							G	G	G	T	T
Template Predicted Secondary structure		.	.	.	.																												.	.	.	.	.	.	.
Template SS confidence
						336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.								.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	A	R	L	I	R	R	R	Q	T	I	E	E	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	W	Y	E	M	Q	D	A	G	I	T	S	D	A	M
Template Known Secondary structure										T	T	G	G	G	S	G	G
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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