Job Description P00861 Confidence 100.00% Date Thu Jan 5 10:56:56 GMT 2012 Rank 29 Aligned Residues 319 % Identity 18% Template c3anuA_ PDB info PDB header:lyase Chain: A: PDB Molecule:d-serine dehydratase; PDBTitle: crystal structure of d-serine dehydratase from chicken kidney Resolution 1.90 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.																									.
Query SS confidence																											.	.	.	.	.																									.
Query Sequence		A	E	F	G	C	P	V	W	V	Y	D	A	Q	I	I	R	R	Q	I	A	A	L	K	Q	F	.	.	.	.	.	D	V	V	R	F	A	Q	K	A	C	S	N	I	H	I	L	R	L	M	R	E	Q	G	V	.	K	V	D	S	V	S	L	G	E	I	E	R	A	L	A	A	G	Y	N	P	Q	T	H	P	D
Query Conservation																											.	.	.	.	.																									.
Alig confidence																											.	.	.	.	.																									.																						.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		D	T	L	P	T	P	A	L	T	I	D	R	T	T	A	R	R	N	A	E	R	M	R	E	R	C	R	A	L	G	V	R	L	R	P	H	V	K	T	H	K	T	L	E	G	G	L	L	A	T	G	G	T	R	R	G	I	A	V	S	T	L	A	E	A	R	F	F	A	D	G	G	F	D	D	I	.	.	.	.
Template Known Secondary structure		G	G	S		S	S																								T						B		T	T	T										T	T	T								S	S										T	T					.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		D	I	V	F	T	A	D	V	I	D	Q	A	T	L	E	R	V	S	E	L	.	.	Q	I	P	V	N	A	G	S	V	D	M	L	D	Q	L	G	Q	V	S	P	G	H	R	V	W	L	R	V	N	P	G	F	G	H	G	H	S	Q	K	T	N	T	G	G	E	N	S	K	H	G	I	W	Y	T	D	L	P	A
Query Conservation																						.	.
Alig confidence																						.	.																																						.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	A	Y	P	V	P	T	A	R	L	E	E	C	A	G	L	A	R	R	L	D	A	F	H	V	L	L	D	R	P	E	A	L	A	S	L	R	Q	R	P	L	G	H	G	K	R	W	L	V	W	L	K	L	D	C	G	R	A	.	.	.	.	.	.	.	.	.	.	G	V	R	P	T	D	P	A	A	L	E
Template Known Secondary structure									G	G	G											S	S																	T	S				T	T														S	.	.	.	.	.	.	.	.	.	.	S	B		T	T	S
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.											.	.	.	.	.	.	.	150	.	.	.
		174	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.										.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240
Predicted Secondary structure										.	.	.																		.	.	.	.	.	.	.	.	.																																							.
Query SS confidence										.	.	.																		.	.	.	.	.	.	.	.	.																																							.
Query Sequence		A	L	D	V	I	Q	R	H	.	.	.	H	L	Q	L	V	G	I	H	M	H	I	G	S	G	V	D	Y	.	.	.	.	.	.	.	.	.	A	H	L	E	Q	V	C	G	A	M	V	R	Q	V	I	E	F	G	Q	D	L	Q	A	I	S	A	G	G	G	L	S	V	P	Y	Q	Q	G	E	.	E	A	V	D
Query Conservation										.	.	.																		.	.	.	.	.	.	.	.	.																																							.
Alig confidence										.	.	.																		.	.	.	.	.	.	.	.	.																																							.
Template Conservation
Template Sequence		L	A	Q	A	I	A	N	D	A	P	E	E	V	T	L	V	G	V	Y	A	H	C	G	N	T	Y	C	S	G	A	D	T	I	Q	A	I	A	R	T	T	T	N	A	V	L	S	F	V	A	A	L	R	Q	A	G	V	P	C	P	Q	A	S	I	G	S	T	P	S	C	S	H	P	I	P	E	M	S	Q	L	T
Template Known Secondary structure									S		T	T	T											G	G	G				S																									T	T																S			G	G	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.															.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	H	Y	Y	G	L	W	N	A	A	R	E	Q	I	A	R	H	L	G	H	P	V	K	L	E	I	E	P	G	R	F	L	V	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	V	L	I	T	Q	V	R	S	V	K	Q	M	G	S	R	H	F	V	L	V	D	A	G	F	N	D	L	M
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	H	P	G	N	Y	I	F	Y	D	L	Q	Q	T	Q	L	G	S	C	Q	P	Q	D	V	A	I	R	V	L	T	R	V	I	G	H	Y	A	H	R	G	.	.	Q	L	L	V	D	C	G	W	A	A	L	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G	T									T	S	S		G	G	G														T	T	T	T	.	.					S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template SS confidence
																											237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	A	M	Y	G	S	Y	H	H	I	S	A	L	A	A	D	G	R	S	L	E	H	A	P	T	V	E	T	V	V	A	G	P	L	C	E	S	G	D	V	F	T	Q	Q	E	G	G	N	V	E	T	R	A	L	P	E	V	K	A	G	D	Y	L	V	L	H	D	T	G	A	Y	G	A	S	M	S	S	N	Y
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																		.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																		.	.
Template Sequence		L	H	G	A	G	G	P	Q	G	C	A	A	I	D	G	H	P	E	L	.	.	.	.	.	.	.	.	.	.	.	R	L	V	G	L	T	Q	E	H	G	L	L	E	H	Q	.	.	.	.	.	.	.	M	D	F	G	R	F	P	V	G	S	V	L	A	L	I	P	Y	.	.	H	A	C	A	T	A	A	M	H
Template Known Secondary structure		S	T	T				G	G	G	G				T	T		T	T		.	.	.	.	.	.	.	.	.	.	.							S	S								.	.	.	.	.	.	.			T	T	S	S		T	T								S	.	.							T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																		.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.												.	310	.	.	.	.	.	.	.	.	.	320	.	.	.								.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	R	P	L	L	P	E	V	L	F	D	N	G	Q	A	R	L	I	R
Query Conservation
Alig confidence			.	.	.	.	.
Template Conservation			.	.	.	.	.
Template Sequence		P	.	.	.	.	.	V	Y	Y	V	H	E	E	G	K	V	V	A	L	W
Template Known Secondary structure		S	.	.	.	.	.							T	T
Template Predicted Secondary structure			.	.	.	.	.
Template SS confidence
		356						.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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