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Job DescriptionP00861
Confidence55.02%DateThu Jan 5 10:56:56 GMT 2012
Rank70Aligned Residues87
% Identity8%Templatec2ylaA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-n-acetylhexosaminidase; PDBTitle: inhibition of the pneumococcal virulence factor strh and2 molecular insights into n-glycan recognition and3 hydrolysis
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   123......130.........140.........150.........160.........170.........180.........190.... .....200.
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Query Sequence  SVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGS. GVDYAHL
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Template Sequence  TQAEVTELIEYAK. . SKDIGLIPAINSPGHMD. . . . . . . . . . . . . . . AMLVAMEKLGIKNPQAHFDKVSKTTMDLKNEEA
Template Known Secondary structure  ..TTT
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   715....720....... ..730.........740.... .....750.........760.........770.......
 
   202.......210....... ..220......
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Query Sequence  EQVCGAMVRQVIEFGQ. DLQAISAGG
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Template Sequence  MNFVKALIGKYMDFFAGKTKIFNFGT
Template Known Secondary structure  BTTBS
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   778.780.........790.........800...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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