Job Description P00861 Confidence 100.00% Date Thu Jan 5 10:56:56 GMT 2012 Rank 16 Aligned Residues 354 % Identity 20% Template c2nvaH_ PDB info PDB header:lyase Chain: H: PDB Molecule:arginine decarboxylase, a207r protein; PDBTitle: the x-ray crystal structure of the paramecium bursaria2 chlorella virus arginine decarboxylase bound to agmatine Resolution 1.80 Å

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		17	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure									.	.																								.	.	.
Query SS confidence									.	.																								.	.	.
Query Sequence		L	L	R	L	P	A	E	.	.	F	G	C	P	V	W	V	Y	D	A	Q	I	I	R	R	Q	I	A	A	L	K	Q	F	.	.	.	D	V	V	R	F	A	Q	K	A	C	S	N	I	H	I	L	R	L	M	R	E	Q	G	V	K	V	D	S	V	S	L	G	E	I	E	R	A	L	A	A	G	Y	N	P	Q
Query Conservation									.	.																								.	.	.
Alig confidence									.	.																								.	.	.
Template Conservation
Template Sequence		M	N	S	V	V	N	N	I	L	Q	T	K	S	F	Y	V	S	S	P	K	I	V	E	D	L	I	D	Q	W	T	I	L	F	P	R	V	T	P	H	Y	A	V	K	C	N	N	D	E	V	L	L	K	T	M	C	D	K	N	V	N	F	D	C	A	S	S	S	E	I	K	K	V	I	Q	I	G	V	S	P	S
Template Known Secondary structure													S																						T	T							G	G	G													T	T							S											T			G	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		T	H	P	D	D	I	V	F	T	A	D	V	I	D	Q	A	T	L	E	R	V	S	E	L	Q	I	.	P	V	N	A	G	S	V	D	M	L	D	Q	L	G	Q	V	S	P	G	H	R	V	W	L	R	V	N	P	G	F	G	H	G	H	S	Q	K	T	N	T	G	G	E	N	S	K	H	G	I	W	Y	T	D
Query Conservation																												.
Alig confidence		.	.	.	.																							.																																				.	.	.	.	.	.
Template Conservation		.	.	.	.																																																											.	.	.	.	.	.
Template Sequence		.	.	.	.	R	I	I	F	A	H	T	M	K	T	I	D	D	L	I	F	A	K	D	Q	G	V	D	I	A	T	F	D	S	S	F	E	L	D	K	I	H	T	Y	H	P	N	C	K	M	I	L	R	I	R	C	D	D	P	N	A	T	V	.	.	.	.	.	.	Q	L	G	N	K	F	G	A	N	E	D	E
Template Known Secondary structure		.	.	.	.	G						S	S													T								S												T	T							B					T	T		S	B	.	.	.	.	.	.			T	T	T	S	S	B		G	G	G
Template Predicted Secondary structure		.	.	.	.																																																											.	.	.	.	.	.
Template SS confidence
						86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.							.	.	.	.	.	.	150	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.
Query SS confidence																																		.	.	.	.
Query Sequence		L	P	A	A	L	D	V	I	Q	R	H	H	L	Q	L	V	G	I	H	M	H	I	G	S	G	V	D	Y	A	H	L	E	.	.	.	.	Q	V	C	G	A	M	V	R	Q	V	I	E	F	G	Q	D	L	Q	A	I	S	A	G	G	G	L	S	V	P	Y	Q	Q	G	E	E	A	V	D	T	E	H	Y	Y	G
Query Conservation																																		.	.	.	.
Alig confidence																																		.	.	.	.																															.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.
Template Sequence		I	R	H	L	L	E	Y	A	K	Q	L	D	I	E	V	I	G	I	S	F	H	V	G	S	G	S	R	N	P	E	A	Y	Y	R	A	I	K	S	S	K	E	A	F	N	E	A	I	S	V	G	H	K	P	Y	I	L	D	I	G	G	G	L	H	A	D	I	.	.	.	.	.	.	G	E	L	S	T	M	S	D
Template Known Secondary structure												T	T												B	S	B																								T												B					.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.							.	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	N	A	A	R	E	Q	I	A	R	H	L	G	H	P	V	K	L	E	I	E	P	G	R	F	L	V	A	Q	S	G	V	L	I	T	Q	V	R	S	V	K	Q	M	G	S	R	H	F	V	L	V	D	A	G	F	N	D	L	M	R	P	A	M	Y	G	S	Y	H	H	I	S	A	L	A	A	D	G	R	S
Query Conservation
Alig confidence														.	.																																																																		.
Template Conservation														.	.																																																																		.
Template Sequence		Y	I	N	D	A	I	K	D	F	F	P	E	.	.	D	T	V	T	I	V	A	E	P	G	R	F	F	A	E	H	Y	S	V	L	A	T	Q	V	I	G	K	R	V	R	D	G	L	Y	E	Y	F	F	N	E	S	T	Y	G	G	F	S	N	V	I	F	E	K	S	V	P	T	P	Q	L	L	R	D	V	P	.
Template Known Secondary structure														.	.	T	T								S					G	G	G														T	T							S			T	T	T	T		T					S									S	S				.
Template Predicted Secondary structure														.	.																																																																		.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	H	A	P	T	V	E	T	V	V	A	G	P	L	C	E	S	G	D	V	F	T	Q	Q	E	G	G	N	V	E	T	R	A	L	P	E	V	K	A	G	D	Y	L	V	L	H	D	T	G	A	Y	G	A	S	M	S	S	N	Y	N	S	R	P	L	L	P	E	V	L	F
Query Conservation
Alig confidence		.																									.	.	.	.	.	.	.
Template Conservation		.																									.	.	.	.	.	.	.
Template Sequence		.	D	D	E	E	Y	V	P	S	V	L	Y	G	C	T	C	D	G	V	D	V	I	N	H	N	.	.	.	.	.	.	.	V	A	L	P	E	L	H	I	G	D	W	V	Y	F	P	S	W	G	A	Y	T	N	V	L	T	T	S	F	N	G	F	G	E	Y	D	V	Y	Y	I
Template Known Secondary structure		.	T	T											S	S	S		T	T							.	.	.	.	.	.	.								T	T						S	S			S	S	S	G	G	G				G	G	G
Template Predicted Secondary structure		.																									.	.	.	.	.	.	.
Template SS confidence
			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.								.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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