Job Description P00861 Confidence 100.00% Date Thu Jan 5 10:56:56 GMT 2012 Rank 9 Aligned Residues 374 % Identity 28% Template c2j66A_ PDB info PDB header:lyase Chain: A: PDB Molecule:btrk; PDBTitle: structural characterisation of btrk decarboxylase from2 butirosin biosynthesis Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		T	A	E	N	L	L	R	L	P	A	E	F	G	C	P	V	W	V	Y	D	A	Q	I	I	R	R	Q	I	A	A	L	K	Q	F	.	.	.	.	D	V	V	R	F	A	Q	K	A	C	S	N	I	H	I	L	R	L	M	R	E	Q	G	V	K	V	D	S	V	S	L	G	E	I	E	R	A	L	A	A	G	Y
Query Conservation																																				.	.	.	.
Alig confidence																																				.	.	.	.
Template Conservation
Template Sequence		D	Q	A	E	I	T	A	L	T	K	R	F	E	T	P	F	Y	L	Y	D	G	D	F	I	E	A	H	Y	R	Q	L	R	S	R	T	N	P	A	I	Q	F	Y	L	S	L	K	A	N	N	N	I	H	L	A	K	L	F	R	Q	W	G	L	G	V	E	V	A	S	A	G	E	L	A	L	A	R	H	A	G	F
Template Known Secondary structure													S		S	S																			T	S		T	T							G	G	G													T	T						S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																															.																		.	.	.	.
Query SS confidence																															.																		.	.	.	.
Query Sequence		N	P	Q	T	H	P	D	D	I	V	F	T	A	D	V	I	D	Q	A	T	L	E	R	V	S	E	L	Q	I	.	P	V	N	A	G	S	V	D	M	L	D	Q	L	G	Q	V	S	.	.	.	.	P	G	H	R	V	W	L	R	V	N	P	G	F	G	H	G	H	S	Q	K	T	N	T	G	G	E	N	S	K
Query Conservation																															.																		.	.	.	.
Alig confidence					.	.	.	.																							.																		.	.	.	.													.	.	.
Template Conservation					.	.	.	.																																																									.	.	.
Template Sequence		S	A	E	.	.	.	.	N	I	I	F	S	G	P	G	K	K	R	S	E	L	E	I	A	V	Q	S	G	I	Y	C	I	I	A	E	S	V	E	E	L	F	Y	I	E	E	L	A	E	K	E	N	K	T	A	R	V	A	I	R	I	N	P	D	.	.	.	K	S	F	T	A	I	K	M	G	G	V	P	R	Q
Template Known Secondary structure			G	G	.	.	.	.	G						S														T		S						S															T												S	.	.	.	S						S	S	S					S
Template Predicted Secondary structure					.	.	.	.																																																									.	.	.
Template SS confidence
		84	.	.					.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.						.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																			.																							.	.	.	.	.
Query SS confidence																			.																							.	.	.	.	.
Query Sequence		H	G	I	W	Y	T	D	L	P	A	A	L	D	V	I	Q	R	.	H	H	L	Q	L	V	G	I	H	M	H	I	G	S	G	V	D	Y	A	H	L	E	.	.	.	.	.	Q	V	C	G	A	M	V	R	Q	V	I	E	F	G	Q	D	L	Q	A	I	S	A	G	G	G	L	S	V	P	Y	Q	Q	G	E	E
Query Conservation																			.																							.	.	.	.	.
Alig confidence																			.																							.	.	.	.	.																																.	.
Template Conservation																																																																														.	.
Template Sequence		F	G	M	D	E	S	M	L	D	A	V	M	D	A	V	R	S	L	Q	F	T	K	F	I	G	I	H	V	Y	T	G	T	Q	N	L	N	T	D	S	I	I	E	S	M	K	Y	T	V	D	L	G	R	N	I	Y	E	R	Y	G	I	V	C	E	C	I	N	L	G	G	G	F	G	V	P	Y	F	.	.	E	K
Template Known Secondary structure		S	S			G	G	G												T	T												S		B																													S								B						.	.
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	D	T	E	H	Y	Y	G	L	W	N	A	A	R	E	Q	I	A	R	H	L	G	H	P	V	K	L	E	I	E	P	G	R	F	L	V	A	Q	S	G	V	L	I	T	Q	V	R	S	V	K	Q	M	G	S	R	H	F	V	L	V	D	A	G	F	N	D	L	M	R	P	A	M	Y	G	S	Y	H	H	I
Query Conservation
Alig confidence																																																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		A	L	D	I	G	K	I	T	R	T	V	S	D	Y	V	Q	E	A	R	D	T	R	F	P	Q	T	T	F	I	I	E	S	G	R	Y	L	L	A	Q	A	A	V	Y	V	T	E	V	L	Y	R	K	A	S	K	G	E	V	F	V	I	V	D	G	G	M	H	H	H	A	A	S	P	M	E	Y	I	.	.	.	.
Template Known Secondary structure																					T	T	T		T	T								S					G	G	G														T	T							S			T	T	T		T	T							.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		S	A	L	A	A	D	G	R	S	L	E	H	A	P	T	V	E	T	V	V	A	G	P	L	C	E	S	G	D	V	F	T	Q	Q	E	G	G	N	V	E	T	R	A	L	P	E	V	K	A	G	D	Y	L	V	L	H	D	T	G	A	Y	G	A	S	M	S	S	.	N	Y	N	S	R	P	L	L	P	E	V	L
Query Conservation																																																																					.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.																											.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	E	K	V	T	I	A	G	P	L	C	T	P	E	D	C	L	G	K	D	.	.	.	.	.	.	.	V	H	V	P	A	L	Y	P	G	D	L	V	C	V	L	N	S	G	A	Y	G	L	S	F	S	P	V	H	F	L	G	H	P	T	P	I	E	I	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.										S	S	S	S	T	T							.	.	.	.	.	.	.				S				T	T						S	S		S	S	S	S	G	G	G	S		T	T	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template SS confidence
															326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.								.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	N	G	Q	A	R	L	I	R	R	R	Q	T	I	E	E	L	L	A	L	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	N	G	S	Y	E	L	I	R	R	K	G	T	A	D	D	I	V	A	T	Q	L
Template Known Secondary structure				T	T																G	G	G
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions