Job Description P66817 Confidence 28.34% Date Thu Jan 5 12:10:20 GMT 2012 Rank 353 Aligned Residues 90 % Identity 17% Template d1p9pa_ SCOP info alpha/beta knot alpha/beta knot tRNA(m1G37)-methyltransferase TrmD Resolution 2.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		Y	A	K	Q	V	R	A	L	G	H	A	G	D	V	L	L	A	I	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	A	V	T	R	D	M	T	I	V	A	L	T	G	Y	D	G	G	E	L	A	G	L	L	G	.	P	Q	D	V	E	I	R	I	P	S	H	R	S	A	R	I	Q	E	M	H	M	L
Query Conservation																																																											.
Alig confidence																																								.	.																		.
Template Conservation																																								.	.
Template Sequence		A	I	H	A	A	K	A	A	A	G	E	G	A	K	V	I	Y	L	S	P	Q	G	R	K	L	D	Q	A	G	V	S	E	L	A	T	N	Q	K	.	.	L	I	L	V	C	G	R	Y	E	G	I	D	E	R	V	I	Q	T	E	I	D	E	E	W	S	I	G	D	Y	V	L	S	G	G	E	L	P	A	M	T
Template Known Secondary structure												T	T																							T		S		.	.								T	T												S					S	S	S	S			S		S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	N	C	L	C	D	L	I	D	N	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	D	S	V	S	R	F	I	P	G	V	L
Template Known Secondary structure								T	T	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions