Job Description P66817 Confidence 88.50% Date Thu Jan 5 12:10:20 GMT 2012 Rank 92 Aligned Residues 100 % Identity 16% Template c3lk7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramoylalanine--d-glutamate ligase; PDBTitle: the crystal structure of udp-n-acetylmuramoylalanine-d-2 glutamate (murd) ligase from streptococcus agalactiae to3 1.5a Resolution 1.50 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		L	N	G	N	K	I	L	C	C	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	V	.	.	.	L	T	A	I	A	N	D	R	L	H	D	E	V	Y	A	K	Q	V	R	A	L	G	H	A	G	D	V	L	L	A
Query Conservation																																																	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.
Template Sequence		F	E	N	K	K	V	L	V	L	G	L	A	R	S	G	E	A	A	A	R	L	L	A	K	.	.	.	.	.	.	.	.	.	L	G	A	I	V	T	V	N	D	G	K	P	F	D	E	N	P	T	A	Q	S	L	L	E	E	G	I	K	V	V	C	G	S	H	P	L	E	L	L	D	E	D	F	C	Y	X	I
Template Known Secondary structure		T	T	T									T	T	T											.	.	.	.	.	.	.	.	.	T	T								S	S		G	G	G										T	T						S				G	G	G	G	G	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30										.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		116	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.												.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure					.	.														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	T	.	.	R	G	N	S	R	D	I	V	K	A	V	E	A	.	.	.	.	.	.	.	.	.	.	.	A	V	T	R	D	M	T	I	V	A	L	T	G	Y	D	G
Query Conservation					.	.														.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	P	G	I	P	Y	N	N	P	X	V	K	K	A	L	E	K	Q	I	P	V	L	T	E	V	E	L	A	Y	L	V	S	E	S	Q	L	I	G	I	T	G	S	N	G
Template Known Secondary structure				T	T	S		T	T	S									T	T																S								S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions