Return to main results Retrieve Phyre Job Id

Job DescriptionP66817
Confidence32.33%DateThu Jan 5 12:10:20 GMT 2012
Rank307Aligned Residues95
% Identity11%Templatec3k96B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glycerol-3-phosphate dehydrogenase [nad(p)+]; PDBTitle: 2.1 angstrom resolution crystal structure of glycerol-3-phosphate2 dehydrogenase (gpsa) from coxiella burnetii
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80......... 90.........100.........
Predicted Secondary structure 

















...........







Query SS confidence 
















































. . . . . . . . . . .



















Query Sequence  GNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAI. . . . . . . . . . . ANDRLHDEVYAKQVRALGHA
Query Conservation    

 
 
 
 
   
   
  
       
       
          ...........                    
Alig confidence 










...









......


















...........



















Template Conservation    

 




 ... 
   
  
 ......  
  
    
       
   
                           
Template Sequence  KHPIAILGAGS. . . WGTALALVLA. . . . . . RKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEG
Template Known Secondary structure 
S


S.........TTT


S
SSBTTTBTT



TTS
TT
Template Predicted Secondary structure 




.........

























Template SS confidence 















































































   5....10..... ....20..... ....30.........40.........50.........60.........70.....
 
   110.........120.........130.........140....
Predicted Secondary structure 











Query SS confidence 


































Query Sequence  GDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTG
Query Conservation   



 

 

 
   
 
   

  
  




 
Alig confidence 


































Template Conservation   
 

  

          
         

   
Template Sequence  VTDILIVVPSFAFHEVITRMKPLIDAKTRIAWGTK
Template Known Secondary structure 




TTT

TT



Template Predicted Secondary structure 











Template SS confidence 


































   76...80.........90.........100.........110
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions