Job Description P66817 Confidence 50.54% Date Thu Jan 5 12:10:20 GMT 2012 Rank 194 Aligned Residues 100 % Identity 13% Template c3hn7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate-l-alanine ligase; PDBTitle: crystal structure of a murein peptide ligase mpl (psyc_0032) from2 psychrobacter arcticus 273-4 at 1.65 a resolution Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	K	I	L	C	C	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	V	L	T	A	I	A	N	D	R	L	H	D	E	V	Y	A	K	Q	V	R	A	L	G	H	A	G	D	V	L	L	A	I	S	T	R	G
Query Conservation
Alig confidence																			.	.	.																																							.	.	.	.
Template Conservation																			.	.	.																																							.	.	.	.
Template Sequence		G	X	H	I	H	I	L	G	I	C	G	T	F	X	G	S	L	.	.	.	A	L	L	A	R	A	L	G	H	T	V	T	G	S	D	A	N	I	Y	P	P	X	S	T	Q	L	E	Q	A	G	V	T	I	E	E	G	Y	L	.	.	.	.	I	A	H	L	Q	P	A	P	D	L	V	V	V	G	N	A	X	K
Template Known Secondary structure									T	T	T	S							.	.	.							T	T								S				T	T								T	T						S			.	.	.	.	G	G	G	G		S			S						T	T
Template Predicted Secondary structure																			.	.	.																																							.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		121	.	.	.	.	.	.	.	.												130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.							.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.							.	.	.
Query Sequence		N	S	R	D	I	V	K	A	V	.	.	.	.	.	.	.	.	.	.	.	E	A	A	V	T	R	.	.	.	D	M	T	I	V	A	L	T	G	Y	D	G
Query Conservation											.	.	.	.	.	.	.	.	.	.	.							.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.							.	.	.
Template Conservation
Template Sequence		R	G	X	D	V	I	E	Y	X	L	D	T	G	L	R	Y	T	S	G	P	Q	F	L	S	E	Q	V	L	Q	S	R	H	V	I	A	V	A	G	T	H	G
Template Known Secondary structure		T	T	S										T														T	G	G	G	S								S	S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions