Return to main results Retrieve Phyre Job Id

Job DescriptionP66817
Confidence51.80%DateThu Jan 5 12:10:20 GMT 2012
Rank190Aligned Residues107
% Identity14%Templatec3ggpA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from a. aeolicus in2 complex with hydroxyphenyl propionate and nad+
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70.........80.........90.........100.........110.........120.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  NKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGHAGDVLLAISTRGN
Query Conservation   

 
 
 
 
   
   
  
       
       
                               



 

 

 
Alig confidence 








.......































































Template Conservation    
 


 
....... 

  

  
   
    
   
                              



  
    
Template Sequence  QNVLIVGVG. . . . . . . FMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRT
Template Known Secondary structure 
S
S.......TT

S
S
TTS
SS
TGGGGGG

S
S
GGG
Template Predicted Secondary structure 



.......























Template SS confidence 















































































   31........ 40.........50.........60.........70.........80.........90.........100...
 
   122.......130.........140.........150.....
Predicted Secondary structure 








Query SS confidence 

































Query Sequence  SRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLG
Query Conservation 
   
 
   

  
  




    
 

 
  
Alig confidence 

































Template Conservation     
            

   
            
Template Sequence  FREIAKKLSYILSEDATVTDQGSVKGKLVYDLEN
Template Known Secondary structure  S
TT


S

T
Template Predicted Secondary structure 









Template SS confidence 

































   104.....110.........120.........130.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions