Return to main results Retrieve Phyre Job Id

Job DescriptionP66817
Confidence20.52%DateThu Jan 5 12:10:20 GMT 2012
Rank483Aligned Residues48
% Identity10%Templatec3g13B_
PDB info PDB header:recombinationChain: B: PDB Molecule:putative conjugative transposon recombinase; PDBTitle: crystal structure of putative conjugative transposon recombinase from2 clostridium difficile
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110 .........120.........130. ........140.....
Predicted Secondary structure 




..






...




Query SS confidence 












. .




















. . .













Query Sequence  VYAKQVRALGHAG. . DVLLAISTRGNSRDIVKAVEA. . . AVTRDMTIVALTGY
Query Conservation               ..



 

 

 
   
 
   ...

  
  




  
Alig confidence 












..




















...













Template Conservation 
    

     
  
 


   


 
           
   

 
      
Template Sequence  EDFQRXINDCXNGEIDXVFTKSISRFARNTLDTLKYVRXLKERNIAVYFEDEK
Template Known Secondary structure  TT

SS
GGGSSSSTT
TTTT
Template Predicted Secondary structure 
















Template SS confidence 




















































   62.......70.........80.........90.........100.........110....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions