Job Description P66817 Confidence 20.17% Date Thu Jan 5 12:10:20 GMT 2012 Rank 489 Aligned Residues 108 % Identity 19% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90									.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.
Query Sequence		G	N	K	I	L	C	C	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	V	L	T	A	I	A	.	.	.	.	.	.	.	.	N	D	R	L	H	D	E	V	Y	A	K	Q	V	R	A	L	G	H	A	G	D	V
Query Conservation																																																				.	.	.	.	.	.	.	.
Alig confidence													.	.	.												.	.	.	.	.	.																				.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation													.	.	.												.	.	.	.	.	.																																							.	.	.	.	.
Template Sequence		C	N	H	A	L	L	V	G	Y	G	R	.	.	.	V	G	S	L	L	G	E	K	L	L	A	.	.	.	.	.	.	S	D	I	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	X	Q	L	.	.	.	.	.	A	H	L	E	C	A
Template Known Secondary structure			S								S		.	.	.												.	.	.	.	.	.	T	T								S											T	T						S		T	T	S							.	.	.	.	.	T	T	G	G	G
Template Predicted Secondary structure													.	.	.												.	.	.	.	.	.																																							.	.	.	.	.
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.				.	.	430	.	.	.	.	.	.	.	.							.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.						.	.	.	480	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		L	L	A	I	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	A	V	T	R	D	.	.	M	T	I	V	A	L	T	G	Y	D	G	G	E	L	A	G	L	L	G	P	Q	D	V	E	I	R
Query Conservation																										.	.
Alig confidence																										.	.
Template Conservation
Template Sequence		K	W	L	I	L	T	I	P	N	G	Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	R	A	H	Y	D	D	E	V	A	Y	I	T	E	R	G	A	N	Q	V	V	X
Template Known Secondary structure		S							S																	S	S	S							S	S										T	T		S
Template Predicted Secondary structure
Template SS confidence
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions